Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YPK_2300 |
Symbol | |
ID | 6089012 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pseudotuberculosis YPIII |
Kingdom | Bacteria |
Replicon accession | NC_010465 |
Strand | + |
Start bp | 2545760 |
End bp | 2546929 |
Gene Length | 1170 bp |
Protein Length | 389 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 641597362 |
Product | tail sheath protein |
Protein accession | YP_001721030 |
Protein GI | 170024525 |
COG category | [R] General function prediction only |
COG ID | [COG3497] Phage tail sheath protein FI |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGTGATT ATCATCACGG CGCGCGCGTC ATCGAAATCA ACGACGGTAC TCGCGTTATT TCCACTGTTT CCACCGCCAT TATCGGCATG GTCTGTACTT CCGATGATGC TGACCCCACT CTGTTCCCAC TCAATACCCC GGTATTACTC ACCGATGTGC TGGCCGCCAG CGGCAAGGCC GGTGAAACCG GCACATTAGC CCATTCACTG GATGCTATCA GCGACCAAAC CAAACCACTG ACCGTCGTTG TCCGGGTGGC GCAGGGTGAA ACCGAAGCTG AAACCACGTC AAATATTATT GGCGGAATAA CACCGGATGG CCGTTATACC GGCATGAAAG CGCTGTTAGC GGCGCAGGGT AAGTTTGACG TCAAGCCCCG TATTTTAGGG GTTCCCGGTC ATGACACTCT GGCGGTATCC ACTGAGCTAC TTTCCATCGC TCAGAGCCTA CGTGCCTTTG CCTACATCAG CGCCTATGGT TGCAAAACCA AAGAAGAGGC CATTATCTAC CGCGATAATT TCAGTCAGCG CGAAGCGATG GTGATTTGGC CCGATTTCCT CAGTTGGGAC ACGGTCACTA ACGCCGAAAC CACCGCTTAC GCCACGGCTC GCGCCCTCGG CTTACGTGCC AAGATTGATA ATGATGTTGG CTGGCATAAA ACGCTGTCTA ACGTCGGGGT GAATGGCGTC ACCGGTATCA GTGCGGATGT GTTCTGGGAT CTGCAAAACA GCGCTACCGA TGCCAATTTG CTCAACAGTA AAGACGTCAC CACGCTGATC CGCAAAGATG GTTACCGTTT TTGGGGTTCC CGTTCTTGTT CTGACGATCC GTTATTTGCC TTTGAGAACT ACACCCGCAC CGCACAGGTA CTGGCTGACA CCCTGGCCGA GGCCCATATG TGGGCTAACG ATAAGCCGCT TACCCCGTCA CTGGCAAAAG ACATTATTGA GGGTATTCGC GCCAAAATGC GCGAGCTGAA ATCATTGGGT TATCTGATTG ATGGTGACTG CTGGTACGAC GACAGCGTAA ACGATAAAGA CACACTAAAG GCTGGCCGCC TGTTTATTGA TTACGACTAT ACGCCGGTGC CGCCGCTGGA AGATTTAACC CTGCGTCAAC GCATTACTGA TCGTTATCTG GCTAATTTCG CCGCCGCCGT TAACAGCTAA
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Protein sequence | MSDYHHGARV IEINDGTRVI STVSTAIIGM VCTSDDADPT LFPLNTPVLL TDVLAASGKA GETGTLAHSL DAISDQTKPL TVVVRVAQGE TEAETTSNII GGITPDGRYT GMKALLAAQG KFDVKPRILG VPGHDTLAVS TELLSIAQSL RAFAYISAYG CKTKEEAIIY RDNFSQREAM VIWPDFLSWD TVTNAETTAY ATARALGLRA KIDNDVGWHK TLSNVGVNGV TGISADVFWD LQNSATDANL LNSKDVTTLI RKDGYRFWGS RSCSDDPLFA FENYTRTAQV LADTLAEAHM WANDKPLTPS LAKDIIEGIR AKMRELKSLG YLIDGDCWYD DSVNDKDTLK AGRLFIDYDY TPVPPLEDLT LRQRITDRYL ANFAAAVNS
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