Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YPK_2273 |
Symbol | |
ID | 6087195 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pseudotuberculosis YPIII |
Kingdom | Bacteria |
Replicon accession | NC_010465 |
Strand | + |
Start bp | 2525211 |
End bp | 2525942 |
Gene Length | 732 bp |
Protein Length | 243 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 641597334 |
Product | pili assembly chaperone |
Protein accession | YP_001721003 |
Protein GI | 170024498 |
COG category | [N] Cell motility [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG3121] P pilus assembly protein, chaperone PapD |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 32 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATCTTGA TTGCCCGCCA AATTATCGCC TGCTCGATGT TGCTGCTCAC CAGCGTATCC TTATCGGTAC AAGCCAGTGT TGTCATGACA GGGACGCGTA TCATTTATCC TGAAGGCTCG CGGGAAAAAG TATTACAGCT GAGTAATAAA GATGACCATC CTAATTTAGT CCAACTGTGG ATGGATGATG GAAATAATCA ATCTTCACCC TCGAAAAGTG ATGTTCCTTT CGCACTGACA CCACAAATAT TCCGGATGGA AGCCAACAGT GGGCAAGTTG TCCGTTTGAC TTACATTGCG CGTAATTTAC CCAAAAATCG TGAATCGGTT TTTTATCTTA ACTTTTTACA AATCCCCGCA TTAAAAGCCG ATACGCAGCC GGATAATAAG TTGGTTTTGA TCGTCAATAA CCGACTAAAA GTCTTTTTCC GCCCTGCAGC GTTAAAGGAA AATATCGATA CGCTAGGTGA AAAAATAAGC GTCACCCTAG ATACAACGAC AGGTAACAAA ATTAAAGTAC ATAACCCAAC AGGTTATTAC ATCAGCCTGC GCGATGCTAA AATTGTCAGT AACGGCAAAA CCGTTTCGTT TGCCACTAGT GAAATGTTCG CGCCCGACTC TACCACTGAT TTGGCCCTGC CCATTGGGAT TAAAGCCAAG AAAGGGGAAT TACTGATACT GAACGTAGTT AATGATTACG GTGCCACCAT TCCTAATAAT TATTATCTGT AA
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Protein sequence | MILIARQIIA CSMLLLTSVS LSVQASVVMT GTRIIYPEGS REKVLQLSNK DDHPNLVQLW MDDGNNQSSP SKSDVPFALT PQIFRMEANS GQVVRLTYIA RNLPKNRESV FYLNFLQIPA LKADTQPDNK LVLIVNNRLK VFFRPAALKE NIDTLGEKIS VTLDTTTGNK IKVHNPTGYY ISLRDAKIVS NGKTVSFATS EMFAPDSTTD LALPIGIKAK KGELLILNVV NDYGATIPNN YYL
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