Gene YPK_2258 details

Gene Information

• Locus tag: YPK_2258
• ID: 6089029
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Yersinia pseudotuberculosis YPIII
• Kingdom: Bacteria
• Replicon accession: NC_010465
• Strand: +
• Start bp: 2509544
• End bp: 2510143
• Gene Length: 600 bp
• Protein Length: 199 aa
• Translation table: 11
• GC content: 41%
• IMG OID: 641597323
• Product: Na(+)-translocating NADH-quinone reductase subunit E
• Protein accession: YP_001720992
• Protein GI: 170024487
• COG category: [C] Energy production and conversion
• COG ID: [COG2209] Na+-transporting NADH:ubiquinone oxidoreductase, subunit NqrE
• TIGRFAM ID: [TIGR01940] NADH:ubiquinone oxidoreductase, Na(+)-translocating, E subunit

Plasmid Coverage information

• Num covering plasmid clones: 32
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGACCGAGA GTTATTTGAC CATTTTTATT AGAGCTGTTT TTGTTGAAAA TATGGCATTA 
AATTTCTTTC TTGGAATGTG CACATTTCTG GCAATATCTA AAAAAGTAGA AACAGCCTTT 
GGCCTTGGGT TGACAGTTAC AGCCCTGCTG GCGATAGCAA CACCTCTCAA TAATCTTATT 
TACACCTATA TACTCAGAGA GAATGCTCTG ATTGATGGAG TGGATCTTAG TTTTCTTGAT 
TTCATTACCT TCATCGGGGT GCTTGCGGCA TTAGTCCAAA TACTTGAAAT GGTACTTGAG 
CGATTTTTGC CAAGCTTACA TCACACCCTG GGGGCCTTTT TACCACTACT GACGATCCAC 
TGTGCAATAT TTGGTGCAAC CATTTTTATG GTTCAGCGAG AATATACGTT CACCGAATCT 
TTTGTTTACG GGACTGGCTG TGGTTTAGGT TGGATGCTGG CCATTATATC CATGGCAGGT 
TTACGAGAAA AAATGAAGTA CTCTAACATT CCAAAAGGGT TGCAAGGGCT CGGCATCGTC 
TTTATGACGG CAGGGCTGAT GTCCTTAGGA TTTATGTCAT TTTCAGGTAT TCGGCTCTAA 

 

Protein sequence

MTESYLTIFI RAVFVENMAL NFFLGMCTFL AISKKVETAF GLGLTVTALL AIATPLNNLI 
YTYILRENAL IDGVDLSFLD FITFIGVLAA LVQILEMVLE RFLPSLHHTL GAFLPLLTIH 
CAIFGATIFM VQREYTFTES FVYGTGCGLG WMLAIISMAG LREKMKYSNI PKGLQGLGIV 
FMTAGLMSLG FMSFSGIRL