| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YPK_2239 |
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| Symbol | hmsR |
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| ID | 6088927 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Yersinia pseudotuberculosis YPIII |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010465 |
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| Strand | - |
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| Start bp | 2482935 |
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| End bp | 2484269 |
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| Gene Length | 1335 bp |
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| Protein Length | 444 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 641597304 |
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| Product | N-glycosyltransferase |
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| Protein accession | YP_001720973 |
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| Protein GI | 170024468 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1215] Glycosyltransferases, probably involved in cell wall biogenesis |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.423629 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATCGATA GAATTATTGC TTTACTCATC CTATGTCTGG TGCTGAGTAT CCCTGCGGGA
ATGATTTTGC TCTTTACCGG CGATGTACTG CTGAACTTTG TTTTCTTCTA TCCACTTTTT
ATGTCCGGTA TTTGGATAAC CGGGGGGGTC TATTTCTGGC TACGCCGAGA GAGGCACTGG
CCGTGGGGCG ATGATGTCCC CGCACCAGAG CTGAAAGGTC ATCCGCTCGT GTCTATCTTA
GTCCCTTGTT TCAATGAGGG GTTGAATGCA CGGGAAACCA TTCACGCAGC ACTGGCACAG
ACCTACACCA ATATTGAAGT TATTGCTATT AACGATGGCT CCAGTGACGA TACCGCACAA
GTCCTAGATG CGCTGCTTGC TGAAGATCCA CGCTTGCGCG TCATTCATCT GGCTCATAAT
CAGGGTAAAG CGATTGCCCT GCGTATGGGG GCCGCCGCCG CCCGCAGTGA ATATCTGGTC
TGTATCGATG GTGATGCCTT GTTGGACAAG AATGCGGTGC CTTATCTGGT CGCGCCACTG
ATTGCGAATC CGCGTACTGG CGCGGTGACC GGTAACCCAC GTATTCGTAC CCGTTCGACA
TTGATTGGCC GCGTTCAGGT CGGGGAGTTC TCTTCGATCA TTGGTTTGAT TAAGCGGACA
CAGCGAGTCT ACGGCCAAGT GTTTACCGTC TCCGGTGTGG TCGCCGCTTT TCGCCGTAGA
GCACTGGCGG ATGTTGGCTA CTGGAGCCCG GATATGATCA CGGAAGATAT TGATATTAGT
TGGAAACTAC AGCTGAAGCA CTGGTCGGTA TTCTTCGAAC CCCGTGGGTT GTGTTGGATT
TTGATGCCTG AAACCCTGCG CGGCTTGTGG AAACAGCGTC TCCGCTGGGC GCAAGGCGGT
GCGGAAGTAT TTTTGAAAAA TATGTTCAAA CTTTGGCGCT GGCGTAACCG CCGGATGTGG
CTGCTGTTTC TGGAGTATTC GTTGTCGATC ACTTGGGCAT TCACTTACCT GTTTAGCATC
ACATTATACC TATTGGGGCT GGTTATCACT CTGCCGCCGG GTATTCATGT TCAAAGTGTC
TTCCCGCCAG CCTTTACCGG GATGGTATTG GCACTGACAT GTCTATTGCA ATTTGCTATT
AGTCTGGTGA TCGAACGCCG CTATGAACCT AAACTGGGTC ATTCCCTGTT TTGGATTATC
TGGTATCCCA TGGTTTATTG GATGCTTAAC TTGTTTACCA CGGTGGTGTC GTTCCCGAAA
GTGATGCTTA TCACCAAGCG TAAGCGTGCG CGTTGGGTAA GCCCTGATCG CGGCATTGGG
AGGGTGAAAT CATGA
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| Protein sequence | MIDRIIALLI LCLVLSIPAG MILLFTGDVL LNFVFFYPLF MSGIWITGGV YFWLRRERHW
PWGDDVPAPE LKGHPLVSIL VPCFNEGLNA RETIHAALAQ TYTNIEVIAI NDGSSDDTAQ
VLDALLAEDP RLRVIHLAHN QGKAIALRMG AAAARSEYLV CIDGDALLDK NAVPYLVAPL
IANPRTGAVT GNPRIRTRST LIGRVQVGEF SSIIGLIKRT QRVYGQVFTV SGVVAAFRRR
ALADVGYWSP DMITEDIDIS WKLQLKHWSV FFEPRGLCWI LMPETLRGLW KQRLRWAQGG
AEVFLKNMFK LWRWRNRRMW LLFLEYSLSI TWAFTYLFSI TLYLLGLVIT LPPGIHVQSV
FPPAFTGMVL ALTCLLQFAI SLVIERRYEP KLGHSLFWII WYPMVYWMLN LFTTVVSFPK
VMLITKRKRA RWVSPDRGIG RVKS
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