| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YPK_2227 |
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| Symbol | astD |
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| ID | 6089059 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Yersinia pseudotuberculosis YPIII |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010465 |
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| Strand | - |
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| Start bp | 2469241 |
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| End bp | 2470758 |
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| Gene Length | 1518 bp |
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| Protein Length | 505 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 641597292 |
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| Product | succinylglutamic semialdehyde dehydrogenase |
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| Protein accession | YP_001720961 |
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| Protein GI | 170024456 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1012] NAD-dependent aldehyde dehydrogenases |
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| TIGRFAM ID | [TIGR03240] succinylglutamic semialdehyde dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCCAGC ACGTCATGTT TAACGCGGTA TTGTCTAGCC ATCCGGCCCT GTTTATACAA
GGTGAATGGC GCATCGGTAA CGGTGTGTCT TTCGAAAAAC AGGATCCTAT GAGTCAGCAG
CGGCTATGGC AGGCGCGTGC AGCAGACCAT ACGGATGTGA CTCTGGCCTG CCATGCCGCA
AGAGCGGCTT TTCCGGCATG GGCACGAGCT TCTCTTGAAC AGCGGGCCAC GGTGATACAG
CAGTTTGCGG CCTTACTCGA ACAGCATAAA CAATCATTAG CGCGAACTAT CAGTCTGGAA
ACCAGCAAGC CATATTGGGA GACGCTAACA GAGGTGCAGG CGATGATCGG CAAGGTGGCT
ATCTCTTTGC AAGCCTATCA AACCCGCACC GGCCATAGCC AAACCCCAAT GGGGGACAGC
ATGTCAGTGC TACGTCACCG GCCTCATGGC GTATTAGCTG TCTTTGGCCC CTATAATTTT
CCAGGCCATT TGCCCAATGG TCATATTGTC CCGGCCTTGC TCGCGGGGAA TACCGTGGTA
TTCAAACCCA GTGAATTGAC CCCATGGACC GCAGAAGAAA CCGTCAAATT GTGGCAACAG
GCGGGGATTC CTGACGGCGT GCTTAATTTG GTGCAGGGCG GGCGTGAAAC GGGCGAGGCA
TTGGCTGCCC AGCCTGATAT TGATGGCTTG TTGTTTACTG GCAGCGCCCA TACCGGCTAC
CACTTACATC GTCAACTGGC GGGTCAGCCG GAAAAAATGC TGGCGCTGGA AATGGGCGGT
AACAATGCAC TGATCGTTGA ACAGGTGAAA GACCGGGATG CGGTTGTCAA TCTTGCCATT
CAATCTGCCT TTATTTCCGC CGGTCAGCGC TGTACCTGTT CACGTCGTTT GCTGGTTAAA
ACCGGGGCTG AGGGCGATGC TTTTTTACTG CGCTTTACCG CCGTTGCGCA AGCATTGCGA
ATTGGCCGCT GGGATGAGCA ACCGGCCCCC TTTATGGGTG CCGTCATTTC ATCTCAGGCG
GCAGAACGGA TGTTGGCGGC TCAGCAACAT TTGCTGTTGT TAGGGGGGGA ATCATTATTA
AACATGACTC GGCCAGATAG CCAAAGTGCG CTACTGACAC CGGGTATCAT TGATATTACC
AATATCAGCG AGGTACCTGA CGAGGAGTAT TTTGGCCCAC TGGTCAGTGT GATCCGCTAC
ACAGACTTTA CTGAGGCGCT GAAAATAGCC AATCAGACCC GATTTGGTCT GGCCGTCGGC
TTGGTTTCTG AAGATCGCCA GCAATTTGAA CAATTGTTAC TGGAAGCCAG AGCAGGGATT
GTTAACTGGA ACAAACCATT GACGGGGGCT TCCAGTGCTG CACCCTTTGG CGGTGTCGGG
GCATCGGGTA ACCATCGGCC CAGCGCCTTT TATGCCGCAG ATTATTGTGC GTGGCCCATG
GCATCACTGG AGTGTGAGCA CTTGACGTTA CCCGCAACAT TATCCCCCGG TATCTCTTTT
GATTTGCCCA AGGTGTGA
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| Protein sequence | MSQHVMFNAV LSSHPALFIQ GEWRIGNGVS FEKQDPMSQQ RLWQARAADH TDVTLACHAA
RAAFPAWARA SLEQRATVIQ QFAALLEQHK QSLARTISLE TSKPYWETLT EVQAMIGKVA
ISLQAYQTRT GHSQTPMGDS MSVLRHRPHG VLAVFGPYNF PGHLPNGHIV PALLAGNTVV
FKPSELTPWT AEETVKLWQQ AGIPDGVLNL VQGGRETGEA LAAQPDIDGL LFTGSAHTGY
HLHRQLAGQP EKMLALEMGG NNALIVEQVK DRDAVVNLAI QSAFISAGQR CTCSRRLLVK
TGAEGDAFLL RFTAVAQALR IGRWDEQPAP FMGAVISSQA AERMLAAQQH LLLLGGESLL
NMTRPDSQSA LLTPGIIDIT NISEVPDEEY FGPLVSVIRY TDFTEALKIA NQTRFGLAVG
LVSEDRQQFE QLLLEARAGI VNWNKPLTGA SSAAPFGGVG ASGNHRPSAF YAADYCAWPM
ASLECEHLTL PATLSPGISF DLPKV
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