Gene YPK_2226 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYPK_2226 
Symbol 
ID6089366 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pseudotuberculosis YPIII 
KingdomBacteria 
Replicon accessionNC_010465 
Strand
Start bp2467874 
End bp2469217 
Gene Length1344 bp 
Protein Length447 aa 
Translation table11 
GC content50% 
IMG OID641597291 
Productsuccinylarginine dihydrolase 
Protein accessionYP_001720960 
Protein GI170024455 
COG category[E] Amino acid transport and metabolism 
COG ID[COG3724] Succinylarginine dihydrolase 
TIGRFAM ID[TIGR03241] succinylarginine dihydrolase 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCAGGAT ATGAAGTTAA CTTCGATGGA TTGGTTGGGC TAACGCATCA TTATGCGGGG 
TTATCCTTTG GCAATGAGGC ATCAACCACG CATCAAAATC GTACTTCCAA CCCTCGTTTG
GCAGCCAAAC AAGGGTTATT GAAGATGAAA GCCTTGGCGG ATTTAGGCTA CAAACAAGGG
GTTCTCCCCC CTCAGGAGCG GCCGGCCATA GGCGTATTAC GCAAGCTAGG GTTCAGTGGC
TCAGATGAAC AGGTCTTAAG CGATGTTGCA CGTAACGCGC CACGTTTACT CTCGGCGGTG
AGTTCAGCAT CCTCCATGTG GACGGCCAAT GCTGCAACGG TATCACCGTC AGCTGACAGT
GCTGATGGGC GGGTCCATTT TACCGTTGCG AATTTGCATA ATAAGTTTCA TCGGGCAATT
GAAGCAGAGA CAACCGCAGT ATTGCTACCC GCGGTGTTCA ATAACCACCG TCATTTTGTT
CATCATGATG CTTTACCTTC CGTGACCTTA TTGGGGGATG AAGGGGCGGC GAACCATAAC
CGTTTAGGGG GCGAGTACGA TAGCCCAGCA ATCCAGATGT TTGTTTATGG GCGTCAAGGC
ATGGAGAGCG GGGCGGTTCC TGGCCGTTAT CCTGCCAGAC AAACACGTGA AGCCAGCCAG
GCGGTGGCAC GGTTGCATCA GTTGGACCCC AAACGCACCG TGTTTGTGCA ACAAAACCCA
GCCGTGATCG ATCAAGGCGT CTTTCACAAC GATGTGATCG CAGTCAGTAA CCGCAATGTA
TTATTCCATC ATGAGTTGGC TTTTCTATCG AGCACACAGG TCATGGACGA TATTCGCTGC
AAGATGGCAG GCTTGGAACA ACAATTAGTC AATATTGAAG TACCAGAAGC CGAAGTTTCC
GTTGCTGATG CCGTGTCAAC CTATCTGTTT AATAGCCAAT TATTGCATAA GGCTAATGGC
AAAATGTTGT TGGTTATTCC GCAGGAGTCA CAAGATAACC CCAGTGTATG GCGGTATTTA
TCTGAGTTGG TCAGCGGCGA TGGGCCGATT GATGAACTCC GTGTTTTCGA TCTGCGCGAG
AGTATGCGTA ATGGCGGTGG CCCGGCTTGC TTACGGTTGC GGGTAGTCTT GAATGATGCT
GAGCTACAGG CAGTTAACAG CCGAGTGATG CTGACACCGG CACTGTTTGT CACATTGAAT
AATTGGGTCG ATCAACATTA TCGGGACCAC CTGCAGTTTA AAGATTTGGC AGATCCGCAC
TTGTTACAAG AAGGGCGGCA AGCGTTGGAT GAGTTAACGC GAATCCTCAA TCTGGGGCCG
GTGTACCCGT TCCAGCGCAA TTAG
 
Protein sequence
MAGYEVNFDG LVGLTHHYAG LSFGNEASTT HQNRTSNPRL AAKQGLLKMK ALADLGYKQG 
VLPPQERPAI GVLRKLGFSG SDEQVLSDVA RNAPRLLSAV SSASSMWTAN AATVSPSADS
ADGRVHFTVA NLHNKFHRAI EAETTAVLLP AVFNNHRHFV HHDALPSVTL LGDEGAANHN
RLGGEYDSPA IQMFVYGRQG MESGAVPGRY PARQTREASQ AVARLHQLDP KRTVFVQQNP
AVIDQGVFHN DVIAVSNRNV LFHHELAFLS STQVMDDIRC KMAGLEQQLV NIEVPEAEVS
VADAVSTYLF NSQLLHKANG KMLLVIPQES QDNPSVWRYL SELVSGDGPI DELRVFDLRE
SMRNGGGPAC LRLRVVLNDA ELQAVNSRVM LTPALFVTLN NWVDQHYRDH LQFKDLADPH
LLQEGRQALD ELTRILNLGP VYPFQRN