Gene YPK_2225 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYPK_2225 
Symbol 
ID6088894 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pseudotuberculosis YPIII 
KingdomBacteria 
Replicon accessionNC_010465 
Strand
Start bp2466821 
End bp2467813 
Gene Length993 bp 
Protein Length330 aa 
Translation table11 
GC content48% 
IMG OID641597290 
Productsuccinylglutamate desuccinylase 
Protein accessionYP_001720959 
Protein GI170024454 
COG category[E] Amino acid transport and metabolism 
COG ID[COG2988] Succinylglutamate desuccinylase 
TIGRFAM ID[TIGR03242] succinylglutamate desuccinylase 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTGGATT TTTTAGCGAT AACCCTATCG GGTAAACCTC CACAAGTCAT ACAGGGTGAA 
ACCGTTAATC TGAAATGGCA ATGGCTCGGT GAGGGGATAT TGACACTGGT TCCGCACCGC
AGCTACACAC AATCGGTGGT GATCTCTGCC GGTATCCACG GCAATGAAAC GGCACCCATT
GAAATTTTGA ATCAATTAGT CACCGATTTA TTAGCGGGTC AACTGACGCT GGCCGTCCGT
CTGTTAGTGT TATTGGGAAA TCCACCGGCG ATCCGCAAAG GGAAGCGGTA CCTCAGCAAT
GACATTAACC GTATGTTTGG TGGGCGTTAT CAGCACTATA CACCCAGTGA CGAGACGCGA
AGGGCGAGTA CTCTGGAGCA ACGGGTGATG GCGTTTTTCC AGGCAAGTCA CACATCAGAG
CGTTTGCATT ATGATCTACA CACCGCAATT CGGGGGTCCT ATCATCCTCG CTTTGGTTTG
TTACCCTACC AGCAGACCCC TTATTCCGCT GCTATGTTTC GTTGGTTGCG GGACATCGAA
CTGGACGCTT TGGTTATGCA CACCTCCGCA GGAGGGACAT TCGCTCACTT TAGCAGTGAG
CGCTGTCAGG CAGCCAGTTG TACGTTGGAG TTAGGCAAAG CATTACCTTT TGGTGAGAAT
CAATTATCAC AATTCAGTGC GATCACCCAA GGATTACGCT CCTTAGTCAG TGATAGTGCC
TTGCCTGCAC GTAAGACAGA GAACATGAAG TACTACCGGG TCGTTAAATC ACTGCTTAGG
CAACACCCTG ATTTTAAACT ACGGGGGGCT GAGGATACGG TAAATTTCAC ACGCTTCGCA
CAAGGCACTC TACTTACAGA ACAACCCAAT GATAACTATC GTGTTGAACA CCCCTATGAG
TGGATCTTAT TTCCAAATCC ACATGTTGCG TTGGGATTAC GGGCTGGGAT GATGTTGGTA
AAAATGTGTG AAAGTGAATT ACCGATTACA TGA
 
Protein sequence
MLDFLAITLS GKPPQVIQGE TVNLKWQWLG EGILTLVPHR SYTQSVVISA GIHGNETAPI 
EILNQLVTDL LAGQLTLAVR LLVLLGNPPA IRKGKRYLSN DINRMFGGRY QHYTPSDETR
RASTLEQRVM AFFQASHTSE RLHYDLHTAI RGSYHPRFGL LPYQQTPYSA AMFRWLRDIE
LDALVMHTSA GGTFAHFSSE RCQAASCTLE LGKALPFGEN QLSQFSAITQ GLRSLVSDSA
LPARKTENMK YYRVVKSLLR QHPDFKLRGA EDTVNFTRFA QGTLLTEQPN DNYRVEHPYE
WILFPNPHVA LGLRAGMMLV KMCESELPIT