| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YPK_2216 |
|---|
| Symbol | |
|---|
| ID | 6089484 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Yersinia pseudotuberculosis YPIII |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010465 |
|---|
| Strand | - |
|---|
| Start bp | 2454464 |
|---|
| End bp | 2455480 |
|---|
| Gene Length | 1017 bp |
|---|
| Protein Length | 338 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | 641597281 |
|---|
| Product | NAD-dependent epimerase/dehydratase |
|---|
| Protein accession | YP_001720950 |
|---|
| Protein GI | 170024445 |
|---|
| COG category | [G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0451] Nucleoside-diphosphate-sugar epimerases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAGTCT TAGTGACAGG GGCAACCAGT GGATTGGGGC GCAACGCAGC ACAATGGCTG
TTGGAGGCAG GGCACGAGGT TTATGCTATC GGGCGGGATC AACTGGCGGG GGAAGAACTG
CGCAAGTTGG GCGCCACCTT TATTCCGCTG GATCTGACCA TGACCACGAT GGAGGTCTGC
CAGCAATGGC TCAAAACGTG CGATGTGGTT TGGCACTGTG CCGCCAAATC AGCACCGTGG
GGTAACCCAC AGGATTTTCA CCAAACCAAT GTGGTGGTGA CGCATAAACT TGCTCAGGCC
GCCGGTCGCG AGGGGGTTAA ACGGTTCATT CATATCTCAT CACCTGCCGT GTATTTCGAT
TTTCGCCATC ATCATGATCT GCCTGAAACA TACCGGGCCA GCCGCTTTTC CAGCCACTAT
GCCAGCAGTA AATATGCGGC GGAGCAGGTG TTGCATGAAT GTATCGCTCA TTATCCGGAC
ACCACGTATG TGATCCTGCG CCCACGTGGG CTATTTGGTC CCCACGATAG GGTGATTGTG
CCGCGTTTGC TGCAACAACT GAGCAGGGAT CGCAATGTGC TGCGTTTACC GGGAGGAGGG
CAAGCGCAGC TTGATCTCAC GTTTGTGTTG AATGTGGTAC ATGCCATGAT GTTAGCCACT
GATAACGACG GGCTACGCTC CGGTGCGATT TATAATATTA CCAATCAGGA GCCACAACGG
CTGGTGACGA TGTTGGATTC TCTGTTGAAT CAGCAGCTTC ACATTAACTA TACCTTGCAG
CCGGTGCCCT ACTCGTTACT TTCTGTCGTG GCGGCAGGGA TGGAACTGGT CGCCAGTATG
ACCCAGAAAG AACCGCTGTT AACCCGTTAC AGTGTTGGCG CAGTCTATTT TGATATGACC
CTTAATTCAG AACGTGCTGT TAATGAACTG GGCTACCGGC CTCGTTACTC GATGGCTGAG
GGGATTGTGC TGGCTGGCGA GTGGCTTAGT GCGCAGAGGA GTGGCCAGCA TGGCTAA
|
|---|
| Protein sequence | MKVLVTGATS GLGRNAAQWL LEAGHEVYAI GRDQLAGEEL RKLGATFIPL DLTMTTMEVC
QQWLKTCDVV WHCAAKSAPW GNPQDFHQTN VVVTHKLAQA AGREGVKRFI HISSPAVYFD
FRHHHDLPET YRASRFSSHY ASSKYAAEQV LHECIAHYPD TTYVILRPRG LFGPHDRVIV
PRLLQQLSRD RNVLRLPGGG QAQLDLTFVL NVVHAMMLAT DNDGLRSGAI YNITNQEPQR
LVTMLDSLLN QQLHINYTLQ PVPYSLLSVV AAGMELVASM TQKEPLLTRY SVGAVYFDMT
LNSERAVNEL GYRPRYSMAE GIVLAGEWLS AQRSGQHG
|
|---|
| |