Gene YPK_2204 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYPK_2204 
Symbol 
ID6089145 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pseudotuberculosis YPIII 
KingdomBacteria 
Replicon accessionNC_010465 
Strand
Start bp2440054 
End bp2440692 
Gene Length639 bp 
Protein Length212 aa 
Translation table11 
GC content46% 
IMG OID641597269 
Producthypothetical protein 
Protein accessionYP_001720938 
Protein GI170024433 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0698] Ribose 5-phosphate isomerase RpiB 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.663487 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAATCG CACTGATGAT GGAAAACAGT CAGGCAGGTA AAAACGCGAT AATCCTTAAA 
GAGCTGAATG CTGTTGCCTC GGAAAAAGCG TATCCGGTAT TCAACGTTGG GATGAGCGAT
GAGCAAGATC ATCATCTGAC TTATATCCAC CTGGGCATCA TGGCCAGCAT TTTGTTGAAT
GCTAAAGCGG TTGATTTTGT GGTGACCGGT TGTGGTACAG GGCAGGGCGC CATGATGTCA
TTGAATATAC ATCCAGGCGT TGTATGTGGT TATTGCATCG ATCCAGCAGA TGCTTTCCTG
TTTGCACAAA TTAACAATGG TAATGCGTTG TCACTGCCGT TTGCTAAAGG CTTTGGCTGG
GGCGCGGAAC TTAACGTGCG CTATATCTTT GAAAAAGCGT TCACTGGTGT GAAAGGCGAA
GGCTATCCAC TTGATCGTAA AGAGCCACAG GTACGTAATG CGGGTATCTT GAATCAAGTG
AAAGCGGCAG TCGTGAAAGA AAATTATCTG GATACACTAC GTGCTATCGA CCCTGAGTTG
GTGAAAACCG CCGTTAGCGG TGCACGTTTC CAGCAGTGTT TCTTTGAAAA CTGTCAGGAT
AAAGAGATTG AAGCGTTCGT GAAACAAATA CTCGCGTAA
 
Protein sequence
MKIALMMENS QAGKNAIILK ELNAVASEKA YPVFNVGMSD EQDHHLTYIH LGIMASILLN 
AKAVDFVVTG CGTGQGAMMS LNIHPGVVCG YCIDPADAFL FAQINNGNAL SLPFAKGFGW
GAELNVRYIF EKAFTGVKGE GYPLDRKEPQ VRNAGILNQV KAAVVKENYL DTLRAIDPEL
VKTAVSGARF QQCFFENCQD KEIEAFVKQI LA