Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YPK_2204 |
Symbol | |
ID | 6089145 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pseudotuberculosis YPIII |
Kingdom | Bacteria |
Replicon accession | NC_010465 |
Strand | - |
Start bp | 2440054 |
End bp | 2440692 |
Gene Length | 639 bp |
Protein Length | 212 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 641597269 |
Product | hypothetical protein |
Protein accession | YP_001720938 |
Protein GI | 170024433 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0698] Ribose 5-phosphate isomerase RpiB |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 0.663487 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAATCG CACTGATGAT GGAAAACAGT CAGGCAGGTA AAAACGCGAT AATCCTTAAA GAGCTGAATG CTGTTGCCTC GGAAAAAGCG TATCCGGTAT TCAACGTTGG GATGAGCGAT GAGCAAGATC ATCATCTGAC TTATATCCAC CTGGGCATCA TGGCCAGCAT TTTGTTGAAT GCTAAAGCGG TTGATTTTGT GGTGACCGGT TGTGGTACAG GGCAGGGCGC CATGATGTCA TTGAATATAC ATCCAGGCGT TGTATGTGGT TATTGCATCG ATCCAGCAGA TGCTTTCCTG TTTGCACAAA TTAACAATGG TAATGCGTTG TCACTGCCGT TTGCTAAAGG CTTTGGCTGG GGCGCGGAAC TTAACGTGCG CTATATCTTT GAAAAAGCGT TCACTGGTGT GAAAGGCGAA GGCTATCCAC TTGATCGTAA AGAGCCACAG GTACGTAATG CGGGTATCTT GAATCAAGTG AAAGCGGCAG TCGTGAAAGA AAATTATCTG GATACACTAC GTGCTATCGA CCCTGAGTTG GTGAAAACCG CCGTTAGCGG TGCACGTTTC CAGCAGTGTT TCTTTGAAAA CTGTCAGGAT AAAGAGATTG AAGCGTTCGT GAAACAAATA CTCGCGTAA
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Protein sequence | MKIALMMENS QAGKNAIILK ELNAVASEKA YPVFNVGMSD EQDHHLTYIH LGIMASILLN AKAVDFVVTG CGTGQGAMMS LNIHPGVVCG YCIDPADAFL FAQINNGNAL SLPFAKGFGW GAELNVRYIF EKAFTGVKGE GYPLDRKEPQ VRNAGILNQV KAAVVKENYL DTLRAIDPEL VKTAVSGARF QQCFFENCQD KEIEAFVKQI LA
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