Gene YPK_2194 details

Gene Information

• Locus tag: YPK_2194
• ID: 6088545
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Yersinia pseudotuberculosis YPIII
• Kingdom: Bacteria
• Replicon accession: NC_010465
• Strand: +
• Start bp: 2432342
• End bp: 2432764
• Gene Length: 423 bp
• Protein Length: 140 aa
• Translation table: 11
• GC content: 51%
• IMG OID: 641597261
• Product: carboxymuconolactone decarboxylase
• Protein accession: YP_001720930
• Protein GI: 170024425
• COG category: [S] Function unknown
• COG ID: [COG0599] Uncharacterized homolog of gamma-carboxymuconolactone decarboxylase subunit
• TIGRFAM ID: [TIGR00778] alkylhydroperoxidase AhpD family core domain

Plasmid Coverage information

• Num covering plasmid clones: 31
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGATGAAAA AGAAAATTCA ACAGTATCTG CTTTGCACTG CTCTTACATT TGCCGGCTCA 
ATGGCTAGCA TTGCTCACGC GCAGGATGCG GCGAAAAATA ACACGAAGCA ACCGTCTCGG 
GCGCAACAAT TGATGGGGGA TATCGCCCCC AAGATGGCGC AACTCACTGA CGATGTCCTG 
TATGCCGATA TCTGGGAACG GCCGCAACTC TCAAAACGTG ACAGGAGCCT GGTGACGGTC 
AGTGCTCTGG TGGCAATGGA TCGCCCTGAC CAATTGCGTT CTCATCTGCG CCTGGCTCGC 
CAGAACGGTG TCACTGAAGA AGAGTTGGTT GAGGCTATAA CCCAACTTGC CTTCTATTCT 
GGATGGCCAA CGGCAGTAAC GGCGATATCC ATTGCAAAAG AAGTATTTAA AGAAGGGAAA 
TAG 

 

Protein sequence

MMKKKIQQYL LCTALTFAGS MASIAHAQDA AKNNTKQPSR AQQLMGDIAP KMAQLTDDVL 
YADIWERPQL SKRDRSLVTV SALVAMDRPD QLRSHLRLAR QNGVTEEELV EAITQLAFYS 
GWPTAVTAIS IAKEVFKEGK