Gene YPK_2178 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYPK_2178 
Symbol 
ID6087841 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pseudotuberculosis YPIII 
KingdomBacteria 
Replicon accessionNC_010465 
Strand
Start bp2416889 
End bp2417719 
Gene Length831 bp 
Protein Length276 aa 
Translation table11 
GC content53% 
IMG OID641597245 
ProductN5-glutamine S-adenosyl-L-methionine-dependent methyltransferase 
Protein accessionYP_001720914 
Protein GI170024409 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG2890] Methylase of polypeptide chain release factors 
TIGRFAM ID[TIGR00536] HemK family putative methylases
[TIGR03534] protein-(glutamine-N5) methyltransferase, release factor-specific 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.255664 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATTATC AGCATTGGCT GTCGTTGGCG GCAGCCCGTT TTACCCACAG TGACAGCCCT 
AAGCGTGATG CTGAAATCCT ACTGAGTTTT GTGACAGGTA AGGCCCGGAC CTATCTGTTG
GCTTTTGGTG AAACGGAAAT AACGGCAGAA CAACTACTGT GGCTCGAAAC ACTGGCGAAC
CGTCGGGAGC AAGGTGAACC TATTGCTTAT CTGGTTGGGG AACGCGAGTT CTGGTCTTTA
CCGCTGAGTG TTTCCTCTGC AACGCTTATC CCACGGCCTG ACACCGAATG TCTGGTGGAG
CAGGCGCTGG CACGTTTGCC CTCAATGCCT TGTCGTATTT TGGACCTGGG GACGGGTACT
GGTGCAATTG CGTTGGCACT GGCCAGTGAA CGGCGTGATT GCGCGGTTAT CGCCGTAGAT
ATCAACGCTG ATGCTGTCGC TTTGGCCCGC CATAATGCAA AAAAACTCGC GATAGATAAT
GTGTGTTTTT TGCAAGGCAG TTGGTTTGAG CCAGTGAGCG GGCGTTTTGC GCTTATCGCC
AGTAACCCCC CTTATATTGA TGCCAATGAC CCTCATCTTA ATGAAGGCGA TGTGCGTTAT
GAGCCGCATA GTGCATTGGT TGCGGCCGCT GAGGGGATGG CCGATCTGGC CGCGATTGTC
AGCCAGGCAC CGGGCTACTT GGAACCCGGC GGTTGGCTCA TGCTAGAGCA TGGCTGGCAG
CAGGCCAACG CAGTGCAAGA ACGGCTTAAA AATTCGGGAT TTAGTGCGGT AATGACCTGT
AAAGATTATG GCAATAATGA CCGGGTGACA TTGGGGCAAT GGTCCGTGTA A
 
Protein sequence
MNYQHWLSLA AARFTHSDSP KRDAEILLSF VTGKARTYLL AFGETEITAE QLLWLETLAN 
RREQGEPIAY LVGEREFWSL PLSVSSATLI PRPDTECLVE QALARLPSMP CRILDLGTGT
GAIALALASE RRDCAVIAVD INADAVALAR HNAKKLAIDN VCFLQGSWFE PVSGRFALIA
SNPPYIDAND PHLNEGDVRY EPHSALVAAA EGMADLAAIV SQAPGYLEPG GWLMLEHGWQ
QANAVQERLK NSGFSAVMTC KDYGNNDRVT LGQWSV