| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YPK_2177 |
|---|
| Symbol | |
|---|
| ID | 6087367 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Yersinia pseudotuberculosis YPIII |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010465 |
|---|
| Strand | - |
|---|
| Start bp | 2416424 |
|---|
| End bp | 2416825 |
|---|
| Gene Length | 402 bp |
|---|
| Protein Length | 133 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 43% |
|---|
| IMG OID | 641597244 |
|---|
| Product | invasion gene expression up-regulator SirB |
|---|
| Protein accession | YP_001720913 |
|---|
| Protein GI | 170024408 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG3094] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 0.0939064 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTGGGTTG ATTACATCGC CATGAAATAT TTGCATTTAC TCACCGTGGT GATCAGCATT
ACTCTGTTTG TACTACGTTT CTTCTGGAAA TGTCGCGGCT CAGCGATGCT TGAAAAGCGT
TGGGTAAAGA TAACGCCGCA CATCAATGAT ACGCTGCTGT TTATCAGTGG TATTGTGCTG
ATATTGATTA CTGGATTCTA TCCATTCAGT CCGCAGGGAA CATGGCTGAC TGAGAAGCTG
TTTGGCGTTA TTATCTACAT CCTGCTTGGC TATGTTGCAT TAGGTAAGCG AACTCGCAGC
CAGAATATTC GCTGGTTTGC CTTTATACTC GCACTGGGTT GCCTGTATCT AATTGTAAAA
CTGGCAACAA CTAAATTACC ACTGCTGATG GGATATCTAT GA
|
|---|
| Protein sequence | MWVDYIAMKY LHLLTVVISI TLFVLRFFWK CRGSAMLEKR WVKITPHIND TLLFISGIVL
ILITGFYPFS PQGTWLTEKL FGVIIYILLG YVALGKRTRS QNIRWFAFIL ALGCLYLIVK
LATTKLPLLM GYL
|
|---|
| |