Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YPK_2175 |
Symbol | |
ID | 6089435 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pseudotuberculosis YPIII |
Kingdom | Bacteria |
Replicon accession | NC_010465 |
Strand | - |
Start bp | 2414668 |
End bp | 2415522 |
Gene Length | 855 bp |
Protein Length | 284 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 641597242 |
Product | 2-dehydro-3-deoxyphosphooctonate aldolase |
Protein accession | YP_001720911 |
Protein GI | 170024406 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG2877] 3-deoxy-D-manno-octulosonic acid (KDO) 8-phosphate synthase |
TIGRFAM ID | [TIGR01362] 3-deoxy-8-phosphooctulonate synthase |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.232249 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAACAGA AAGTGGTTAG CATTGGCGAT ATCAACGTAG CGAACGACCT GCCTTTCGTG CTGTTTGGTG GTATGAATGT GCTTGAGTCA CGCGATCTGG CGATGCGCAT CTGCGAGCAT TACGTGACGG TGACTCAAAA GCTCGGCATC CCTTACGTAT TTAAAGCCTC GTTCGACAAA GCCAACCGTT CTTCAATTCA TTCTTACCGC GGCCCAGGCC TGGAAGAAGG GATGAAAATC TTTCAAGAGC TGAAGCAACA GTTTGGCGTT AAAGTGATCA CCGATGTGCA TGAAGCCAGC CAGGCACAGC CAGTATCTGA AGTGGTTGAT GTTATCCAGT TGCCTGCATT CTTGGCGCGT CAAACAGATT TGGTCGAGGC GATGGCCCGT ACCGGTGCTG TCATCAACGT GAAAAAACCT CAGTTCGTTA GCCCCGGTCA GATGGGCAAT ATCGTTGAGA AATTTAAAGA AGCGGGTAAC GACCAGGTGA TCCTCTGTGA TCGCGGCAGT AACTTTGGTT ATGACAATCT GGTGGTTGAT ATGTTGGGTA TCAATGTGAT GGTACAAGCA ACAGGCGGTC ACCCGGTTAT TTTCGATGTG ACTCATGCGT TACAATGCCG TGACCCGTTT GGCGCGGCAT CTGGTGGCCG TCGTGCTCAG GTCGCTGAAC TGGCCCGCGC AGGTATGGCG GTTGGTTTGG CAGGGCTATT TATCGAAGCA CATCCAGAGC CGAATAGCGC GAAATGTGAT GGTCCATCAG CACTACCACT GGATAAGTTG GAGCCATTCT TAGTGCAGAT GAAGGCTATC GATGATTTGG TGAAGAGTTT CCCTGCGCTG GATACCAGTA AGTAA
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Protein sequence | MKQKVVSIGD INVANDLPFV LFGGMNVLES RDLAMRICEH YVTVTQKLGI PYVFKASFDK ANRSSIHSYR GPGLEEGMKI FQELKQQFGV KVITDVHEAS QAQPVSEVVD VIQLPAFLAR QTDLVEAMAR TGAVINVKKP QFVSPGQMGN IVEKFKEAGN DQVILCDRGS NFGYDNLVVD MLGINVMVQA TGGHPVIFDV THALQCRDPF GAASGGRRAQ VAELARAGMA VGLAGLFIEA HPEPNSAKCD GPSALPLDKL EPFLVQMKAI DDLVKSFPAL DTSK
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