| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YPK_2152 |
|---|
| Symbol | |
|---|
| ID | 6090411 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Yersinia pseudotuberculosis YPIII |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010465 |
|---|
| Strand | + |
|---|
| Start bp | 2383219 |
|---|
| End bp | 2384190 |
|---|
| Gene Length | 972 bp |
|---|
| Protein Length | 323 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | 641597220 |
|---|
| Product | methyltransferase |
|---|
| Protein accession | YP_001720891 |
|---|
| Protein GI | 170024386 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG2230] Cyclopropane fatty acid synthase and related methyltransferases |
|---|
| TIGRFAM ID | [TIGR00452] methyltransferase, putative |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATTGAAT TTGGCGATTT TTATCGGCTG ATTGCCAAAG GCCCATTAAG CCCATGGTTA
GATACTCTGC CCGCACAGCT CAGCGCCTGG CAGCGCGAAT CGTTACACGG TAAATTTAAA
ACCTGGTTTA ACGCCGTGGA ACATTTGCCT CAACTGACGC CCACCACACT GGATCTACAC
TCAGGCGTAA GGGCCGAAAT GTCCCCGCCC ATTTCGGCTG GGCAACGTGA AGGAATGGAG
AATATGCTGC GCGCCCTGAT GCCTTGGCGC AAAGGCCCCT TCTCGCTATA TGGGTTGGAG
ATCGATACCG AATGGCGTTC AGATTGGAAG TGGCAACGGG TCTTGCCCCA TATCAGCCCA
CTGGCAGGCC GTACTATTCT GGATGTCGGC TGCGGCAGCG GTTACCACCT GTGGCGCATG
ATTGGTGAAG GTGCCCATCT GGCGGTCGGC ATTGATCCAA TGCAGCTATT TTTATGTCAG
TTTGAAGCGA TCCGTAAGCT TTTGGGGGGC GATCAGCGAG CGCATGTCCT GCCTCTTGGC
ATTGAACAAC TGCCGGAATT GGCTGCTTTT GATACCGTGT TTTCCATGGG GGTGCTGTAT
CACCGCCGTT CGCCACTGGA TCACCTCTAT CAACTTAAAA ACCAGTTAGT TACTGACGGA
GAACTGGTGC TAGAGACACT GGTCGTCGAA GGGGACAGCC AACAAGTGTT GGTGCCAGGT
GATCGTTACG CGCAAATGCG CAATGTGTAC TTTATTCCTT CGGCACCCGC CCTAAAAGCC
TGGCTGGAGA AGTGTGGTTT CGTTGATGTC AGAATAGCGG ATATGGCCGT GACTACGACT
GAAGAGCAGC GTCGTACTGA TTGGATGACC AGTGAATCAT TAGCCGAGTT CCTTGACCCG
CACGATCACA GTAAAACGGT AGAAGGCTAT CCGGCACCAC TAAGAGCGGT GTTAATCGCC
CGTAAGCCAT AA
|
|---|
| Protein sequence | MIEFGDFYRL IAKGPLSPWL DTLPAQLSAW QRESLHGKFK TWFNAVEHLP QLTPTTLDLH
SGVRAEMSPP ISAGQREGME NMLRALMPWR KGPFSLYGLE IDTEWRSDWK WQRVLPHISP
LAGRTILDVG CGSGYHLWRM IGEGAHLAVG IDPMQLFLCQ FEAIRKLLGG DQRAHVLPLG
IEQLPELAAF DTVFSMGVLY HRRSPLDHLY QLKNQLVTDG ELVLETLVVE GDSQQVLVPG
DRYAQMRNVY FIPSAPALKA WLEKCGFVDV RIADMAVTTT EEQRRTDWMT SESLAEFLDP
HDHSKTVEGY PAPLRAVLIA RKP
|
|---|
| |