Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YPK_2146 |
Symbol | |
ID | 6087506 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pseudotuberculosis YPIII |
Kingdom | Bacteria |
Replicon accession | NC_010465 |
Strand | - |
Start bp | 2376936 |
End bp | 2377679 |
Gene Length | 744 bp |
Protein Length | 247 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 641597214 |
Product | hypothetical protein |
Protein accession | YP_001720885 |
Protein GI | 170024380 |
COG category | [S] Function unknown |
COG ID | [COG0217] Uncharacterized conserved protein |
TIGRFAM ID | [TIGR01033] DNA-binding regulatory protein, YebC/PmpR family |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCAGGTC ATAGTAAATG GGCCAACACA AAACACCGCA AAGCGGCACA GGATGCCAAA CGCGGTAAGA TTTTCACTAA AATCATTCGT GAACTCGTCA CTGCAGCCCG TCTGGGCGGT GGTGACCCCG GTGCTAACCC ACGTCTCCGT GCGGCTATCG ACAAAGCGTT GTCAAACAAT ATGACACGCG ACACCCTAAA CCGGGCGATT GCCCGTGGCG TGGGTGGTGA TGAAGATAAC AACATGGAAA CCATCATTTA CGAAGGTTAT GGCCCAGGTG GCACAGCCGT AATGGTTGAA TGCTTGAGTG ACAATCGTAA CCGTACCGTA TCTGAAGTTC GCCATGCATT CACCAAAACA GGGGGGAATC TGGGCACTGA TGGTTCTGTT TCTTATCTGT TTACCAAAAA AGGCGTTATT TCTTATGCGC CGGGTTTGGA AGAAGATACG GTGATGGATG CAGCGTTAGA AGCGGGTGCA GATGATATCG TGGTTTACGA TGATGGTGCG ATCGATGTGT TTACTGCATG GGAATCTCTG GGCGCGGTAA AAGATGTGTT GGATGCTACC GGTTTGGTGG CTGAAGGTGC AGAAGTGTCA TTAATCCCAT CAACCAAAGC GGAATTGGAT GCTGAAACTG CCCCCAAACT GCTGCGTTTG ATTGATATGC TGGAAGATTC TGATGATGTG CAAGAGGTTT ACCATAATGG TGAAATCTCT GATGAAGTAG CAGCAACCCT GTAA
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Protein sequence | MAGHSKWANT KHRKAAQDAK RGKIFTKIIR ELVTAARLGG GDPGANPRLR AAIDKALSNN MTRDTLNRAI ARGVGGDEDN NMETIIYEGY GPGGTAVMVE CLSDNRNRTV SEVRHAFTKT GGNLGTDGSV SYLFTKKGVI SYAPGLEEDT VMDAALEAGA DDIVVYDDGA IDVFTAWESL GAVKDVLDAT GLVAEGAEVS LIPSTKAELD AETAPKLLRL IDMLEDSDDV QEVYHNGEIS DEVAATL
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