| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YPK_2138 |
|---|
| Symbol | |
|---|
| ID | 6088501 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Yersinia pseudotuberculosis YPIII |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010465 |
|---|
| Strand | - |
|---|
| Start bp | 2368925 |
|---|
| End bp | 2369887 |
|---|
| Gene Length | 963 bp |
|---|
| Protein Length | 320 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 641597206 |
|---|
| Product | lipid A biosynthesis (KDO)2-(lauroyl)-lipid IVA acyltransferase |
|---|
| Protein accession | YP_001720877 |
|---|
| Protein GI | 170024372 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG1560] Lauroyl/myristoyl acyltransferase |
|---|
| TIGRFAM ID | [TIGR02208] lipid A biosynthesis (KDO)2-(lauroyl)-lipid IVA acyltransferase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.265497 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCACAAAG AAAAAAATGA CGCAACTGGT TTTATTCCGG TATTTCAGAA AACCTTCCTC
CATCCGCGTT TCTGGGGGGT TTGGTTAGGT GCTGGAGCGA TTGCGGCGCT CGCTTATATT
CCACCCAAAT TCCGTGATCC TTTATTAGCT GGCATAGGGC GTCTCGCTGG GAAATTTGCT
AAAAGCGCCC GTCGTCGCGC TCGTATTAAT CTTCTTTATT GTATGCCTGA GTTACCCGAG
TCTGAACGCG AACACATTAT TGACCAGATG TTTGCTACCG CAGCTCAACC GTTAATGATG
ATGGCAGAAC TTTGTTTTCG TGATCCGAAA AAAGTGCTGA CTCGCGTGCA CTGGCATGGA
CAGGAAATAC TGGATGAGCT GCAACAACAA GAGCGTAATG TTATTTTGTT GGTCCCCCAT
GCCTGGTCCA TTGATATTCC GGCTATGCTG CTAGCGGAGC AGGGCAAGCC AGTTGCAGGT
ATGTTCCATC ATCAACGTAA TCCATTGGTG GACTATCTAT GGAACAGTGC GCGTTTACAT
TTCGGTGGTC GGATCCATGC CCGCGAAAGT GGCATCAAAC CTTTTATCAG TTCAGTACGC
CAAGGATTCT GGGGTTACTA CTTACCTGAT GAAGATTATG GTCCTGAGCA AAGTGAATTT
GTTGATTTCT TCGCGACCTA TAAGGCGACA TTACCGGCAA TAGGCCGTTT AATGAAAGTC
TGCCGTGCGG CCATTGTACC GATGTTCCCT GTTTATAATT ATAGAGAGCA TCGTCTTGAT
ATCTATATCC GTCCGCCAAT GGATGATTTG GCGGATGCTG ATGACGCCTA TATTGCCCGC
CGGATGAATG AGGAAGTGGA GTTGTTGGTT AAGCCGAATC CAGAGCAATA TACATGGATC
TTAAAGCTGT TAAAAACCCG GAAAGAGGGT GAAACCGAGC CCTATGTGCG CAAAGATCTT
TAG
|
|---|
| Protein sequence | MHKEKNDATG FIPVFQKTFL HPRFWGVWLG AGAIAALAYI PPKFRDPLLA GIGRLAGKFA
KSARRRARIN LLYCMPELPE SEREHIIDQM FATAAQPLMM MAELCFRDPK KVLTRVHWHG
QEILDELQQQ ERNVILLVPH AWSIDIPAML LAEQGKPVAG MFHHQRNPLV DYLWNSARLH
FGGRIHARES GIKPFISSVR QGFWGYYLPD EDYGPEQSEF VDFFATYKAT LPAIGRLMKV
CRAAIVPMFP VYNYREHRLD IYIRPPMDDL ADADDAYIAR RMNEEVELLV KPNPEQYTWI
LKLLKTRKEG ETEPYVRKDL
|
|---|
| |