Gene YPK_2135 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYPK_2135 
Symbol 
ID6089110 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pseudotuberculosis YPIII 
KingdomBacteria 
Replicon accessionNC_010465 
Strand
Start bp2365876 
End bp2366781 
Gene Length906 bp 
Protein Length301 aa 
Translation table11 
GC content47% 
IMG OID641597203 
ProductDNA-binding transcriptional regulator HexR 
Protein accessionYP_001720874 
Protein GI170024369 
COG category[K] Transcription 
COG ID[COG1737] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAATCGG TAAAACCCAT GGGTGGCTCT CGTTATATGA ATACGCTGGA AAATATCCAA 
AATAGTATGG ACCTTCTGAG CAAATCAGAA AGGAAAGTCG CCGAGGTAAT CCTTGCCTCC
CCGCAAACGG CCATCCATTC TAGTATCGCT ACACTTGCCA AAATGGCGAA TGTCAGCGAA
CCGACAGTCA ACCGTTTTTG CCGTCGTCTG GAGACCAAAG GTTTCCCTGA TTTTAAACTG
CATTTGGCGC AAAGTCTGGC GAACGGTACA CCCTATGTGA ATCGTAACGT CGAAGAAGAT
GATAGTGTAG CTGCGTACAC CGGAAAAATT TTTGAATCGA CGATGGCCAG CTTGGACCGC
GTAAAAAACA ATCTGGATAT CGCCGCCATT AACCGGGCTG TCGATTTATT GACTCAAGCG
AAAAAAATCT CGTTCTTTGG CCTGGGTTCC TCCGCTGCCG TTGCTCATGA TGCGATGAAT
AAGTTTTTCC GCTTTAATAT CCCGGTAATT TATTTCGATG ACATCGTTAT GCAACGCATG
AGTTGTATGA ACTCAAGCGA AGGCGATGTG GTAGTGTTGA TCTCCCACAC AGGGCGAACC
AAAAGCCTGG TGGAGCTGGC GCAGTTGGCT CGTGAAAATG ATGCTGCCGT GATTGCCATA
ACTTCATGTG ATACGCCACT GGCCAACGAA GCAACCTTAT CGCTGTTGCT GGATGTGCCG
GAAGATACCG ATATGTATAT GCCAATGGTG TCACGCATCG CCCAGCTCAC GTTGATTGAT
GTGCTGGCAA CGGGCTTCAC CCTACGGCGC GGAGCAAAAT TTAGGGATAA TTTGAAGCGG
GTCAAAGAGG CATTGAAAGA ATCTCGTTTT GATAAGGATT CTTTGCCAGT AAACAACGGT
GATTAA
 
Protein sequence
MKSVKPMGGS RYMNTLENIQ NSMDLLSKSE RKVAEVILAS PQTAIHSSIA TLAKMANVSE 
PTVNRFCRRL ETKGFPDFKL HLAQSLANGT PYVNRNVEED DSVAAYTGKI FESTMASLDR
VKNNLDIAAI NRAVDLLTQA KKISFFGLGS SAAVAHDAMN KFFRFNIPVI YFDDIVMQRM
SCMNSSEGDV VVLISHTGRT KSLVELAQLA RENDAAVIAI TSCDTPLANE ATLSLLLDVP
EDTDMYMPMV SRIAQLTLID VLATGFTLRR GAKFRDNLKR VKEALKESRF DKDSLPVNNG
D