Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YPK_2135 |
Symbol | |
ID | 6089110 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pseudotuberculosis YPIII |
Kingdom | Bacteria |
Replicon accession | NC_010465 |
Strand | + |
Start bp | 2365876 |
End bp | 2366781 |
Gene Length | 906 bp |
Protein Length | 301 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 641597203 |
Product | DNA-binding transcriptional regulator HexR |
Protein accession | YP_001720874 |
Protein GI | 170024369 |
COG category | [K] Transcription |
COG ID | [COG1737] Transcriptional regulators |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAAATCGG TAAAACCCAT GGGTGGCTCT CGTTATATGA ATACGCTGGA AAATATCCAA AATAGTATGG ACCTTCTGAG CAAATCAGAA AGGAAAGTCG CCGAGGTAAT CCTTGCCTCC CCGCAAACGG CCATCCATTC TAGTATCGCT ACACTTGCCA AAATGGCGAA TGTCAGCGAA CCGACAGTCA ACCGTTTTTG CCGTCGTCTG GAGACCAAAG GTTTCCCTGA TTTTAAACTG CATTTGGCGC AAAGTCTGGC GAACGGTACA CCCTATGTGA ATCGTAACGT CGAAGAAGAT GATAGTGTAG CTGCGTACAC CGGAAAAATT TTTGAATCGA CGATGGCCAG CTTGGACCGC GTAAAAAACA ATCTGGATAT CGCCGCCATT AACCGGGCTG TCGATTTATT GACTCAAGCG AAAAAAATCT CGTTCTTTGG CCTGGGTTCC TCCGCTGCCG TTGCTCATGA TGCGATGAAT AAGTTTTTCC GCTTTAATAT CCCGGTAATT TATTTCGATG ACATCGTTAT GCAACGCATG AGTTGTATGA ACTCAAGCGA AGGCGATGTG GTAGTGTTGA TCTCCCACAC AGGGCGAACC AAAAGCCTGG TGGAGCTGGC GCAGTTGGCT CGTGAAAATG ATGCTGCCGT GATTGCCATA ACTTCATGTG ATACGCCACT GGCCAACGAA GCAACCTTAT CGCTGTTGCT GGATGTGCCG GAAGATACCG ATATGTATAT GCCAATGGTG TCACGCATCG CCCAGCTCAC GTTGATTGAT GTGCTGGCAA CGGGCTTCAC CCTACGGCGC GGAGCAAAAT TTAGGGATAA TTTGAAGCGG GTCAAAGAGG CATTGAAAGA ATCTCGTTTT GATAAGGATT CTTTGCCAGT AAACAACGGT GATTAA
|
Protein sequence | MKSVKPMGGS RYMNTLENIQ NSMDLLSKSE RKVAEVILAS PQTAIHSSIA TLAKMANVSE PTVNRFCRRL ETKGFPDFKL HLAQSLANGT PYVNRNVEED DSVAAYTGKI FESTMASLDR VKNNLDIAAI NRAVDLLTQA KKISFFGLGS SAAVAHDAMN KFFRFNIPVI YFDDIVMQRM SCMNSSEGDV VVLISHTGRT KSLVELAQLA RENDAAVIAI TSCDTPLANE ATLSLLLDVP EDTDMYMPMV SRIAQLTLID VLATGFTLRR GAKFRDNLKR VKEALKESRF DKDSLPVNNG D
|
| |