Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YPK_2124 |
Symbol | |
ID | 6087248 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pseudotuberculosis YPIII |
Kingdom | Bacteria |
Replicon accession | NC_010465 |
Strand | - |
Start bp | 2353998 |
End bp | 2355119 |
Gene Length | 1122 bp |
Protein Length | 373 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 641597192 |
Product | ribonuclease D |
Protein accession | YP_001720863 |
Protein GI | 170024358 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0349] Ribonuclease D |
TIGRFAM ID | [TIGR01388] ribonuclease D |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.0137564 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGAATTATC AGTTGATCAC GACCAATAAC GCATTGCAAC AGGTCTGCGA ACAAGCCCGG ACACATGCTC ACATCGCGTT GGATACAGAG TTTGTCAGAA CGCGCACTTA CTACCCTCAG TTGGGTTTGA TTCAACTGTA TGATGGTGAA CAACTCTCAC TTATAGATCC ATTACCTATC ACGGAATGGC AGCCTTTTCG CGCGTTACTG CAAGATCTGA ATGTGGTGAA ATATTTACAC GCAGGCAGTG AAGATCTCGA AGTGTTTTTA AACGCTTTTG ACCAGATGCC AACCCCGATG ATTGATACTC AGGTATTAGC GGCATTTTCT GGCCGTAGCC TATCCTGCGG CTTTGCCATG CTGGTGGCTG AGTTTGAAGG TGTTGAGTTA GATAAAAGTG AATCACGTAC AGACTGGATT GCCCGGCCGT TGAGTGAAAA ACAGTGCGAT TATGCGGCGG CTGATGTGTT TTATCTTTTA CCTCTGGCGG CTAAATTAGT CGAAGCCACT GAGGCGGCAG GGCGGATGGA CGCGGCGAAA GACGAATGTC TATTGCTGTG CCGCCGTCGG AGTGAGACGC TCGATCCTGA ACTGGCTTAC CGTGAGATTA CCAATGCCTG GCAACTCCGT GGCCATCAAC TGGCATGTTT GCAGAAATTA GCCGAATGGC GTTTACGTCA GGCACGGGAG CGGGATTTGG CGGTTAACTT TGTGGTTAGG GAAGAGCACC TGTGGCAAGT TGCCCGCTAT CAACCAACAT CACTCGGTGA GTTAGATTCT CTTGGCTTGA GTGGGCAGGA GATCCGCTAT CACGGGCGAA CATTGCTGGC ACTGGTCGCC GAAGGGAATG CCGTCCCTGA AGATCAGCTT CCTCCCCCGA TTGCTAACTT GATTGACCAA CCGGGGTACA AAAAAGTCTT TAAAGATATT AAAGCCTTGA TTCAATCGGT CAGTGAACGT AGCGGATTAA GCAGTGAATT ACTGGCATCA CGTCGCCAAA TTAATCAGTT ACTCAATTGG CACTGGAAGT TGAAGCTTTC AGATGCTCAA CCTGAATTAT TAACAGGCTG GCGTGGCGAT TTATTGTCTT CTGAATTGCT TGAAATCTTA CAACACTATT AA
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Protein sequence | MNYQLITTNN ALQQVCEQAR THAHIALDTE FVRTRTYYPQ LGLIQLYDGE QLSLIDPLPI TEWQPFRALL QDLNVVKYLH AGSEDLEVFL NAFDQMPTPM IDTQVLAAFS GRSLSCGFAM LVAEFEGVEL DKSESRTDWI ARPLSEKQCD YAAADVFYLL PLAAKLVEAT EAAGRMDAAK DECLLLCRRR SETLDPELAY REITNAWQLR GHQLACLQKL AEWRLRQARE RDLAVNFVVR EEHLWQVARY QPTSLGELDS LGLSGQEIRY HGRTLLALVA EGNAVPEDQL PPPIANLIDQ PGYKKVFKDI KALIQSVSER SGLSSELLAS RRQINQLLNW HWKLKLSDAQ PELLTGWRGD LLSSELLEIL QHY
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