Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YPK_2115 |
Symbol | |
ID | 6088281 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pseudotuberculosis YPIII |
Kingdom | Bacteria |
Replicon accession | NC_010465 |
Strand | + |
Start bp | 2345994 |
End bp | 2347193 |
Gene Length | 1200 bp |
Protein Length | 399 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 641597183 |
Product | aminotransferase class V |
Protein accession | YP_001720854 |
Protein GI | 170024349 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1104] Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes |
TIGRFAM ID | [TIGR03402] cysteine desulfurase NifS |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.903448 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTACAGTC AGAACCCACC GATATATCTC GATAATAACG CGACAACGGC ACTAGACCCT GCCGTCCTGC AGGCGATGAT GCCATACCTA ACCCACGCTT ATGGCAATGC CGCCAGTAAG AGCCACCCCT TTGGCTGGGA AGCGAGCCAG GCTGTTCAAC GGGCCAGAAC ATTAATCGCA ACCGCTATCA ATGCAGTCAG TCCCGCCGAT ATCATCTTCA CCTCTGGCGC GACAGAATCC ATCAATCTTG CCATCTTAGG CCTTCAGTAT CAGGGGAATT GGGGGCATAT CATCACCTCC ATGATTGAAC ACAAGTCAGT TCTGGACTGC TGTGCCAAAC TTGCCGACAG TGGGGTTAGT GTGACTTATC TGCAGCCACA GCGTGACGGT ATTGTTTCCC TTGATACCCT ATTCCAAGCT ATCCGGCCCG ATACGCGTCT GGTCTCAATC ATGACTGCCA ACAACGAGAC AGGTACCTTG CAAAAAGTGG CAAAAATTGG CGCACTCTGC CGGGATAAGG GCATTTTATT TCATACCGAT GCCACACAGG CGTTCGGGAA AATCGCTTTA GATATGCAAC GGATGAATAT CAGTATGGCC ACTTTTTCCG CACATAAAGT TTACGGCCCC ATGGGGGTCG GGGCACTTTA TGTCAATACC GCCGATCCGC ATCTTATGCT TTCACCACTC ATCGTTGGCG GAGGGAATGA GCGAGGTTTA CGCTCCGGCA CACTCAATGT ACCGGGCATT GTCGGCTTTG GACGCGCCGC CGAACTGGCG ATGGAAAACA TGTCAGTAGA ATCGGCCAGG CTATGTGATT TACGAAACAG GCTACGGCAG CACATTCTCG ATACCGTACC GAATGTGCAG GTCAACGGCC ACCTTACTGA ATGCCTGCCC GGCGTGTTAA ACGTGTCCTT TGAGGGTATC GATGCCGACT CGCTGTTGCT CGAACTCTCT GACGTTGCCT TGTCCTCAGG ATCCGCCTGC ACCTCCGATC AACAGATACC ATCACACGTG TTACAGGCTC TAGGGGTGAG TGATGAGCAG ATCCGGGGGA GTGTGCGCTT TGGACTCGGA CGGTTTAATA ACGAAAGTGA AATCGATTAC GTCTGCCAGC GTCTGGAAAA TACGGTGAAA ATGCTGAGAT CAATGGCTCC GCTCTCATCT GCTACAACCA CAAACGAGAC AGGAGTCTGA
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Protein sequence | MYSQNPPIYL DNNATTALDP AVLQAMMPYL THAYGNAASK SHPFGWEASQ AVQRARTLIA TAINAVSPAD IIFTSGATES INLAILGLQY QGNWGHIITS MIEHKSVLDC CAKLADSGVS VTYLQPQRDG IVSLDTLFQA IRPDTRLVSI MTANNETGTL QKVAKIGALC RDKGILFHTD ATQAFGKIAL DMQRMNISMA TFSAHKVYGP MGVGALYVNT ADPHLMLSPL IVGGGNERGL RSGTLNVPGI VGFGRAAELA MENMSVESAR LCDLRNRLRQ HILDTVPNVQ VNGHLTECLP GVLNVSFEGI DADSLLLELS DVALSSGSAC TSDQQIPSHV LQALGVSDEQ IRGSVRFGLG RFNNESEIDY VCQRLENTVK MLRSMAPLSS ATTTNETGV
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