Gene YPK_2102 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYPK_2102 
Symbol 
ID6089284 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pseudotuberculosis YPIII 
KingdomBacteria 
Replicon accessionNC_010465 
Strand
Start bp2330552 
End bp2331826 
Gene Length1275 bp 
Protein Length424 aa 
Translation table11 
GC content48% 
IMG OID641597170 
Producthypothetical protein 
Protein accessionYP_001720841 
Protein GI170024336 
COG category[S] Function unknown 
COG ID[COG2718] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.277028 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGGCTATT TCATTGACAG ACGACTTAAC GGCAAGAATA AAAGCATGGT GAATCGCCAG 
CGCTTTTTAC GCCGCTATAA GTCGCAAATT AAACAATCGA TTGCCGATGC CATCAACAAA
CGGTCGGTAA CCGATATAGA AAGTGGCGAG TCAGTTTCAA TACCTATCGA CGACATCAAT
GAGCCAATGT TTCATCAAGG CAATGGTGGG TTGCGCCATC GAGTGCACCC TGGCAATGAC
CACTTTATCA CCAATGACCG GGTAGACCGC CCTCAAGGCG GCGGAGGTGG CGGTAGCGGT
CAAGGTAATG CCGGTAAAGA TGGTGAAGGT GAGGATGAGT TTGTCTTTCA GATCTCTAAA
GATGAATACC TGGACTTACT GTTTGAAGAT CTCGCCCTGC CCAATCTGAA AAGAAACCAG
TACAAACAGC TGGCAGAATT TAAGACACAC CGAGCGGGAT ATACCTCTAA TGGTGTGCCA
GCCAATATCA GTGTGGTACG TTCACTGCAG AATTCACTGG CTCGCCGGAC TGCGATGACC
GCCAGCAAAC GGCGCGAGTT GCGTGAACTG GAGGCGGCGC TTACTGTGCT GGAGAATTCT
GAGCCAGCGC AATTGTTAGA AGAAGAGCGC TTACGCAAGG CGATTACCGA GTTAAAGCAA
AAAATTGCTC GGGTTCCGTT TATTGATACC TTTGATTTAC GCTATAAAAA TTACGAGCGT
CGCCCTGAGC CCTCCAGTCA AGCCGTCATG TTCTGCTTGA TGGATGTCTC GGGATCCATG
GACCAAGCCA CGAAAGATAT GGCTAAGCGG TTTTATATTC TGCTCTATCT CTTCCTGAGC
CGGACCTATA AAAACGTCGA TGTGGTGTAT ATCCGCCACC ATACGCAAGC CAAAGAAGTG
GATGAACAGG AGTTTTTCTA CTCGCAAGAA ACCGGCGGAA CCATCGTCTC CAGTGCACTG
AAATTGATGG ATGAAGTGGT TCAAGAGCGT TATAACCCGG CGCAGTGGAA CATTTATGCC
GCTCAGGCTT CTGATGGTGA TAACTGGGCA GATGACTCAC CGTTGTGCCA TGAATTACTG
GCCAAAAAGA TTCTACCGGT GGTGCGTTAC TACAGTTATA TCGAGATAAC CCGCCGCGCT
CATCAAACGT TATGGCGCGA GTATGAAGAT CTGGAAGAGA AATTCGACAA CTTTGCCATA
CAACATATTC GTGAACCCGA AGATATTTAT CCCGTCTTCC GTGAGTTGTT CCACAAACAG
ACCGTAGATA ATTAG
 
Protein sequence
MGYFIDRRLN GKNKSMVNRQ RFLRRYKSQI KQSIADAINK RSVTDIESGE SVSIPIDDIN 
EPMFHQGNGG LRHRVHPGND HFITNDRVDR PQGGGGGGSG QGNAGKDGEG EDEFVFQISK
DEYLDLLFED LALPNLKRNQ YKQLAEFKTH RAGYTSNGVP ANISVVRSLQ NSLARRTAMT
ASKRRELREL EAALTVLENS EPAQLLEEER LRKAITELKQ KIARVPFIDT FDLRYKNYER
RPEPSSQAVM FCLMDVSGSM DQATKDMAKR FYILLYLFLS RTYKNVDVVY IRHHTQAKEV
DEQEFFYSQE TGGTIVSSAL KLMDEVVQER YNPAQWNIYA AQASDGDNWA DDSPLCHELL
AKKILPVVRY YSYIEITRRA HQTLWREYED LEEKFDNFAI QHIREPEDIY PVFRELFHKQ
TVDN