Gene YPK_2100 details

Gene Information

• Locus tag: YPK_2100
• ID: 6088150
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Yersinia pseudotuberculosis YPIII
• Kingdom: Bacteria
• Replicon accession: NC_010465
• Strand: +
• Start bp: 2328468
• End bp: 2330402
• Gene Length: 1935 bp
• Protein Length: 644 aa
• Translation table: 11
• GC content: 45%
• IMG OID: 641597168
• Product: putative serine protein kinase, PrkA
• Protein accession: YP_001720839
• Protein GI: 170024334
• COG category: [T] Signal transduction mechanisms
• COG ID: [COG2766] Putative Ser protein kinase

Plasmid Coverage information

• Num covering plasmid clones: 7
• Plasmid unclonability p-value: 0.00284243
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAACATAT TTGATCATTA TCGCCAGCGC TATGAAGCGG CCAAGGACGA AGAGTTCACT 
CTGCAGGAAT TCCTCGCTAT CTGTCAGCAA GATCGTAGTG CGTATGCCAA TGCGGCTGAA 
CGTCTGCTGA TGGCTATTGG TGAGCCAGTC ATGGTCGATA CCGCACTAGA ATCCCGCATG 
TCTCGGCTAT TTTCTAATCG AGTTATCGCG CGTTATCCTG CGTTTGAAGA GTTCTATGGC 
ATGGAGGAAG CCATAGAACA GATTGTTTCT TATCTCAAAC ATGCCGCTCA AGGACTGGAA 
GAGAAGAAAC AAATCCTTTA TTTGCTCGGC CCGGTCGGCG GGGGTAAATC ATCACTGGCG 
GAGCGCTTAA AAGCGCTGAT GCAACGTGTG CCTATCTATA TATTAAGTGC TAATGGCGAA 
CGTAGCCCCG TGAATGACCA TCCTCTGTGC CTATTTAACC CGCAGGAAGA TGCGGCAATT 
TTGGCCAAAG AGTACAACAT TCCAAACCGC TATCTCGGTA CTATCATGTC GCCATGGGCG 
GCAAAACGGC TACATGAGTT TGGCGGTGAC ATCACTAAAT TCAAGGTTAT CAAAGTCTGG 
CCTTCTATCC TTGAACAGAT TGCGATAGCA AAAACTGAAC CCGGTGATGA GAATAATCAG 
GATATTTCCG CATTGGTGGG AAAAGTGGAT ATCCGTAAGC TGGAGCATCA CGCCCAGAAC 
GATCCTGACG CCTATGGTTA TTCCGGTGCA TTGTGCCGCG CAAACCAAGG GATAATGGAA 
TTCGTTGAGA TGTTTAAAGC ACCTATTAAA GTGCTGCATC CATTATTGAC CGCAACGCAG 
GAAGGAAACT ATAACGGAAC GGAGGGAATA TCCGCCCTTC CATTTAGTGG AATTATTCTC 
GCGCACTCAA ACGAATCTGA ATGGGTGACA TTCCGTAATA ATAAAAATAA TGAGGCCTTC 
CTTGACCGTG TTTATATCGT CAAAGTGCCT TACTGCCTAC GGGTCTCGGA AGAGATCAAA 
ATTTATGACA AGTTGCTCCA GAACAGTGAA CTGACCCATG CACCTTGTGC TCCGGGGACG 
TTGGAAACGC TGGCACGGTT CTCGATTCTT TCGCGAATGA AAGAGCCAGC GAATTCCAGC 
ATTTACTCCA AAATGCGGGT GTATGACGGT GAAAGTTTGA AAGATACCGA TCCAAAAGCC 
AAATCTTATC AGGAGTATCG GGATTACGCG GGGGTTGATG AAGGGATGAG CGGCCTATCC 
ACCCGTTTCG CTTTTAAAAT TCTGTCGCGG GTATTTAACT TTGACCATGC TGAAGTGGCA 
GCCAACCCAG TTCATCTGTT TTATGTGTTA GAACAACAAA TTGAGCGTGA ACAGTTCCAA 
CAAGATATTG CAGAGAAATA CCTTGAGCAC CTGAAAGGTT ATCTGATCCC AAAATATGCC 
GAATTTATCG GGAAAGAGAT CCAAACCGCC TATCTGGAAT CTTACTCTGA ATACGGCCAG 
AACATATTTG ACCGCTATGT TATCTATGCT GATTTTTGGA TTCAGGATCA AGAGTACCGA 
GATCCTGATA CCGGTCAGCT GTTTGACCGT GAATCACTGA ATGCAGAATT GGAGAAAATT 
GAAAAACCCG CAGGTATCAG TAATCCAAAA GATTTTCGTA ATGAAATTGT CAACTTTGTG 
TTACGCGCCA GAGCAAATAA CAATGGCCGT AATCCAAACT GGACCAGTTA TGAAAAGTTG 
CGCACGGTGA TCGAGAAGAA AATGTTCTCC AATACCGAAG AGTTACTGCC GGTTATCTCC 
TTTAATGCCA AAACGTCAAC GGATGAACAG AAAAAGCATG ATGATTTTGT CGATAGGATG 
ATGGAGAAAG GTTATACCCG TAAGCAAGTT CGTTTGCTAT GTGAATGGTA TCTGCGGGTA 
AGAAAGTCTT CATAA 

 

Protein sequence

MNIFDHYRQR YEAAKDEEFT LQEFLAICQQ DRSAYANAAE RLLMAIGEPV MVDTALESRM 
SRLFSNRVIA RYPAFEEFYG MEEAIEQIVS YLKHAAQGLE EKKQILYLLG PVGGGKSSLA 
ERLKALMQRV PIYILSANGE RSPVNDHPLC LFNPQEDAAI LAKEYNIPNR YLGTIMSPWA 
AKRLHEFGGD ITKFKVIKVW PSILEQIAIA KTEPGDENNQ DISALVGKVD IRKLEHHAQN 
DPDAYGYSGA LCRANQGIME FVEMFKAPIK VLHPLLTATQ EGNYNGTEGI SALPFSGIIL 
AHSNESEWVT FRNNKNNEAF LDRVYIVKVP YCLRVSEEIK IYDKLLQNSE LTHAPCAPGT 
LETLARFSIL SRMKEPANSS IYSKMRVYDG ESLKDTDPKA KSYQEYRDYA GVDEGMSGLS 
TRFAFKILSR VFNFDHAEVA ANPVHLFYVL EQQIEREQFQ QDIAEKYLEH LKGYLIPKYA 
EFIGKEIQTA YLESYSEYGQ NIFDRYVIYA DFWIQDQEYR DPDTGQLFDR ESLNAELEKI 
EKPAGISNPK DFRNEIVNFV LRARANNNGR NPNWTSYEKL RTVIEKKMFS NTEELLPVIS 
FNAKTSTDEQ KKHDDFVDRM MEKGYTRKQV RLLCEWYLRV RKSS