Gene YPK_2085 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYPK_2085 
Symbol 
ID6087635 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pseudotuberculosis YPIII 
KingdomBacteria 
Replicon accessionNC_010465 
Strand
Start bp2314548 
End bp2315354 
Gene Length807 bp 
Protein Length268 aa 
Translation table11 
GC content48% 
IMG OID641597153 
Productexonuclease III 
Protein accessionYP_001720824 
Protein GI170024319 
COG category[L] Replication, recombination and repair 
COG ID[COG0708] Exonuclease III 
TIGRFAM ID[TIGR00195] exodeoxyribonuclease III
[TIGR00633] exodeoxyribonuclease III (xth) 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.40103 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGTTCG TTTCTTTTAA TATCAATGGC CTACGTGCTC GTCCTCATCA ATTAGCCGCA 
ATAATTGAGC AGCATCAACC GGATGTGATC GGCCTACAAG AAACTAAGGT ACATGATGAT
ATGTTTCCTC TTGAAGACGT CAGCCAGCAT GGTTACCACG TTTTTTACCA TGGGCAAAAA
GGTCATTACG GTGTTGCACT ATTGACGAAA GAACAGCCAC TGGCTGTGCG CCGAGGTTTC
CCAAGCGATG AAGAAGATGC ACAGCGCCGT ATTATCATGG CCGACTTAGC CACCCCGCAA
GGCACCTTAA CGGTAATCAA TGGTTATTTT CCTCAGGGAG AAAGTCGTGA CCATCCAATA
AAGTTCCCCG CTAAAGCGCG CTTTTATGCT GACCTGCAAC GCTATCTTGA GGAGCAACTC
TCCCCTGAGG CCCAGGTACT TATCATGGGG GACTTGAATA TCAGTCCAAC CGATTTAGAT
ATCGGTATTG GTGAAGATAA CCGTAAACGC TGGCTGCGCA CAGGCAAATG CTCGTTCTTA
CCAGAAGAAC GAGAGTGGCT GGAACGTCTG CAAAACTGGG GGTTGGTTGA TACTTTCCGC
GCGGCTAATC CTGATTGTAA TGACCATTTT TCATGGTTTG ATTACCGTTC CCGTGGTTTT
GATGAAAACA GAGGCCTTCG CATCGATTTA TTGCTGGCCA GTCAACCACT GGCGGCTCGT
TGTATTGCTA CAGGTATTGA TTATGCAATC CGTGGGATGG AAAAACCATC AGACCACGCG
CCGGTTTGGT CCGAATTCTC ACTTTAA
 
Protein sequence
MKFVSFNING LRARPHQLAA IIEQHQPDVI GLQETKVHDD MFPLEDVSQH GYHVFYHGQK 
GHYGVALLTK EQPLAVRRGF PSDEEDAQRR IIMADLATPQ GTLTVINGYF PQGESRDHPI
KFPAKARFYA DLQRYLEEQL SPEAQVLIMG DLNISPTDLD IGIGEDNRKR WLRTGKCSFL
PEEREWLERL QNWGLVDTFR AANPDCNDHF SWFDYRSRGF DENRGLRIDL LLASQPLAAR
CIATGIDYAI RGMEKPSDHA PVWSEFSL