| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YPK_2080 |
|---|
| Symbol | purU |
|---|
| ID | 6089113 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Yersinia pseudotuberculosis YPIII |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010465 |
|---|
| Strand | + |
|---|
| Start bp | 2311140 |
|---|
| End bp | 2311988 |
|---|
| Gene Length | 849 bp |
|---|
| Protein Length | 282 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 43% |
|---|
| IMG OID | 641597147 |
|---|
| Product | formyltetrahydrofolate deformylase |
|---|
| Protein accession | YP_001720820 |
|---|
| Protein GI | 170024315 |
|---|
| COG category | [F] Nucleotide transport and metabolism |
|---|
| COG ID | [COG0788] Formyltetrahydrofolate hydrolase |
|---|
| TIGRFAM ID | [TIGR00655] formyltetrahydrofolate deformylase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.0789639 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCCACACC AGAATGTACA AAAGAAAGTA TTGCGCACTA TTTGCCCTGA CGCTAAAGGT
TTGATCGCAA AGATCACTAA TATCTGCTAC AAGCACCAAT TGAATATCGT ACAAAATAAT
GAATTTGTTG ATCACCTGAC TGGTCGCTTC TTTATGCGCA CCGAGCTTGA GGGGATTTTT
AACGATACGA CATTACTGGC AGATCTTGAC GATGCATTAC CTGAAGGCAC TAATCGCGAG
TTACACGTTG CTGGGCGCCG CCGCATCATC ATTATGGTAA CGAAAGAAGC ACATTGCCTT
GGCGACTTAT TAATGAAGAG TGCTTATGGT GGCTTAGATG TAGAAATTGC GGCAGTCATT
GGTAACCATG ATGCATTGCA AAATTTAGTC GAGCGTTTTG ATATCCCATT CCATCTGGTC
AGCCATGAAG GCCTCACCCG TGAGCAGCAT GATCAACAGT TGATTGAGAA AATTGAACAA
TATCAACCAG ATTATGTTGT TCTGGCTAAA TATATGCGGG TGCTAACACC GGCCTTTGTG
CAACGTTTCC CTTATCAAAT TATTAATATT CATCATTCAT TTTTGCCTGC ATTTATCGGT
GCTCGGCCAT ACCACCAAGC GTATGAACGC GGAGTGAAGA TTATTGGCGC TACTGCTCAT
TACGTAAATG ATAGCTTGGA TGAAGGCCCA ATCATCATGC AGGACGTGAT CAATGTGGAT
CATTCTTATA CTGCTGAAGA TATGATGCGT GCTGGTCGTG ATGTAGAAAA GAATGTTCTC
AGTAGTGCGC TATACCGTGT TCTCGCTCAA CGTGTTTTTG TTTACGGTAA CCGCACTGTT
ATCCTATAA
|
|---|
| Protein sequence | MPHQNVQKKV LRTICPDAKG LIAKITNICY KHQLNIVQNN EFVDHLTGRF FMRTELEGIF
NDTTLLADLD DALPEGTNRE LHVAGRRRII IMVTKEAHCL GDLLMKSAYG GLDVEIAAVI
GNHDALQNLV ERFDIPFHLV SHEGLTREQH DQQLIEKIEQ YQPDYVVLAK YMRVLTPAFV
QRFPYQIINI HHSFLPAFIG ARPYHQAYER GVKIIGATAH YVNDSLDEGP IIMQDVINVD
HSYTAEDMMR AGRDVEKNVL SSALYRVLAQ RVFVYGNRTV IL
|
|---|
| |