Gene YPK_2069 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYPK_2069 
SymboloppB 
ID6088790 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pseudotuberculosis YPIII 
KingdomBacteria 
Replicon accessionNC_010465 
Strand
Start bp2295986 
End bp2296906 
Gene Length921 bp 
Protein Length306 aa 
Translation table11 
GC content44% 
IMG OID641597136 
Productoligopeptide transporter permease 
Protein accessionYP_001720809 
Protein GI170024304 
COG category[E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism 
COG ID[COG0601] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.186457 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTAAAGT TTATTCTACG TCGTTGTCTG GAAGCGATTC CGACGCTATT TATCTTGATT 
ACCATCTCAT TCTTTATGAT GCGCCTCGCT CCCGGAAGCC CATTTACTGG TGAGCGTAAC
CTTCCTCCAG AAGTTATGGC TAATATTGAG GCGAAGTATC ACCTCAATGA TCCTATTTAT
AAACAGTATT TCAATTACTT GGGGCAACTT GCAAAAGGTG ACCTTGGCCC GTCGTTTAAA
TATAAAGATT ACACCGTGAA CGATTTAGTT TCATCGTCGT TTCCCGTCTC AGCAAAACTG
GGGTTTGCCG CATTTATGTT AGCGGTAATA TTAGGTGTCA GTGCTGGAGT GATCGCGGCG
CTGAACCAAA ATACGAAGTG GGACTATACG GTGATGGGTT TTGCGATGAC TGGGGTCGTC
ATACCCAGTT TTGTTGTTGC TCCTTTATTA GTGCTGGTTT TCGCCATTAT ATTGAAATGG
CTCCCTGGTG GTGGCTGGAA TGGTGGTGCA CCAAAATATA TCATTTTACC TATGGTTGCG
CTGTCATTGG CCTATATCGC CAGTATTGCG CGTATTACCC GCGGGTCAAT GATTGAAGTT
CTGCACTCCA ATTTTATTCG AACTGCACGT GCGAAGGGGT TACCACTACG TACAATTGTA
TTGCGCCATG CATTAAAGCC AGCGTTGCTA CCGGTTCTTT CCTATATGGG GCCAGCTTTT
GTTGGCATTA TTACGGGATC GATGGTTATT GAAACTATTT TTGGCTTACC GGGTATTGGC
CAATTATTTG TCAACGGAGC GTTAAACCGC GATTACTCAT TGGTCTTGAG TCTGACTATT
TTGGTCGGCG CTTTAACTAT TTTATTTAAT GCGATTGTTG ACGTGTTGTA TGTCGTTATC
GATCCAAAAA TCCGTTACTA G
 
Protein sequence
MLKFILRRCL EAIPTLFILI TISFFMMRLA PGSPFTGERN LPPEVMANIE AKYHLNDPIY 
KQYFNYLGQL AKGDLGPSFK YKDYTVNDLV SSSFPVSAKL GFAAFMLAVI LGVSAGVIAA
LNQNTKWDYT VMGFAMTGVV IPSFVVAPLL VLVFAIILKW LPGGGWNGGA PKYIILPMVA
LSLAYIASIA RITRGSMIEV LHSNFIRTAR AKGLPLRTIV LRHALKPALL PVLSYMGPAF
VGIITGSMVI ETIFGLPGIG QLFVNGALNR DYSLVLSLTI LVGALTILFN AIVDVLYVVI
DPKIRY