Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YPK_2069 |
Symbol | oppB |
ID | 6088790 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pseudotuberculosis YPIII |
Kingdom | Bacteria |
Replicon accession | NC_010465 |
Strand | - |
Start bp | 2295986 |
End bp | 2296906 |
Gene Length | 921 bp |
Protein Length | 306 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 641597136 |
Product | oligopeptide transporter permease |
Protein accession | YP_001720809 |
Protein GI | 170024304 |
COG category | [E] Amino acid transport and metabolism [P] Inorganic ion transport and metabolism |
COG ID | [COG0601] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.186457 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTTAAAGT TTATTCTACG TCGTTGTCTG GAAGCGATTC CGACGCTATT TATCTTGATT ACCATCTCAT TCTTTATGAT GCGCCTCGCT CCCGGAAGCC CATTTACTGG TGAGCGTAAC CTTCCTCCAG AAGTTATGGC TAATATTGAG GCGAAGTATC ACCTCAATGA TCCTATTTAT AAACAGTATT TCAATTACTT GGGGCAACTT GCAAAAGGTG ACCTTGGCCC GTCGTTTAAA TATAAAGATT ACACCGTGAA CGATTTAGTT TCATCGTCGT TTCCCGTCTC AGCAAAACTG GGGTTTGCCG CATTTATGTT AGCGGTAATA TTAGGTGTCA GTGCTGGAGT GATCGCGGCG CTGAACCAAA ATACGAAGTG GGACTATACG GTGATGGGTT TTGCGATGAC TGGGGTCGTC ATACCCAGTT TTGTTGTTGC TCCTTTATTA GTGCTGGTTT TCGCCATTAT ATTGAAATGG CTCCCTGGTG GTGGCTGGAA TGGTGGTGCA CCAAAATATA TCATTTTACC TATGGTTGCG CTGTCATTGG CCTATATCGC CAGTATTGCG CGTATTACCC GCGGGTCAAT GATTGAAGTT CTGCACTCCA ATTTTATTCG AACTGCACGT GCGAAGGGGT TACCACTACG TACAATTGTA TTGCGCCATG CATTAAAGCC AGCGTTGCTA CCGGTTCTTT CCTATATGGG GCCAGCTTTT GTTGGCATTA TTACGGGATC GATGGTTATT GAAACTATTT TTGGCTTACC GGGTATTGGC CAATTATTTG TCAACGGAGC GTTAAACCGC GATTACTCAT TGGTCTTGAG TCTGACTATT TTGGTCGGCG CTTTAACTAT TTTATTTAAT GCGATTGTTG ACGTGTTGTA TGTCGTTATC GATCCAAAAA TCCGTTACTA G
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Protein sequence | MLKFILRRCL EAIPTLFILI TISFFMMRLA PGSPFTGERN LPPEVMANIE AKYHLNDPIY KQYFNYLGQL AKGDLGPSFK YKDYTVNDLV SSSFPVSAKL GFAAFMLAVI LGVSAGVIAA LNQNTKWDYT VMGFAMTGVV IPSFVVAPLL VLVFAIILKW LPGGGWNGGA PKYIILPMVA LSLAYIASIA RITRGSMIEV LHSNFIRTAR AKGLPLRTIV LRHALKPALL PVLSYMGPAF VGIITGSMVI ETIFGLPGIG QLFVNGALNR DYSLVLSLTI LVGALTILFN AIVDVLYVVI DPKIRY
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