Gene YPK_2029 details

Gene Information

• Locus tag: YPK_2029
• Symbol: ribA
• ID: 6087187
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Yersinia pseudotuberculosis YPIII
• Kingdom: Bacteria
• Replicon accession: NC_010465
• Strand: +
• Start bp: 2257514
• End bp: 2258116
• Gene Length: 603 bp
• Protein Length: 200 aa
• Translation table: 11
• GC content: 46%
• IMG OID: 641597096
• Product: GTP cyclohydrolase II
• Protein accession: YP_001720769
• Protein GI: 170024264
• COG category: [H] Coenzyme transport and metabolism
• COG ID: [COG0807] GTP cyclohydrolase II
• TIGRFAM ID: [TIGR00505] GTP cyclohydrolase II

Plasmid Coverage information

• Num covering plasmid clones: 20
• Plasmid unclonability p-value: 0.221958
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAACAATG ATATGCAGCT AAAACGTGTA GCAGAAGCAA AGTTACCCAC TCCTTGGGGT 
GACTTTTTAA TGGTCGGTTT TGAAGAATTG GCCACCGGGC ATGACCACCT GGCCTTGATA 
TTCGGTGATA TCTCCGGTGA TAAACCGGTT CTGTCCCGTG TACATTCTGA ATGCCTGACT 
GGTGATGCTT TATTTAGCCT GCGTTGTGAC TGTGGTTTTC AGTTAGAGGT TGCACTGACG 
CGTATCGCGG AAGAAGGCCG TGGTGTGCTG ATTTATCATC GTCAGGAGGG CCGTAATATT 
GGCTTGCTGA ATAAAATTCG TGCTTATGCA TTGCAGGATT TAGGGGCTGA TACGGTAGAA 
GCCAATCATC AGCTTGGTTT TGCTGCGGAT GAACGTGATT TCACACTCTG TTCTGATATG 
TATAAATTAT TAGGCATCAA AGCGGTTCGT CTGCTGACCA ACAACCCTAA AAAGGTCGAG 
ATCCTCACCC AAGCGGGGAT CAATATCGTC GAACGTGTGC CACTGATCGT GGGCGAAAAC 
CCAAAAAACG AACATTATCT GGCAACCAAA GCGGCCAAAA TGGGGCATTT ACTCACCAAA 
TAA 

 

Protein sequence

MNNDMQLKRV AEAKLPTPWG DFLMVGFEEL ATGHDHLALI FGDISGDKPV LSRVHSECLT 
GDALFSLRCD CGFQLEVALT RIAEEGRGVL IYHRQEGRNI GLLNKIRAYA LQDLGADTVE 
ANHQLGFAAD ERDFTLCSDM YKLLGIKAVR LLTNNPKKVE ILTQAGINIV ERVPLIVGEN 
PKNEHYLATK AAKMGHLLTK