| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YPK_2026 |
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| Symbol | |
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| ID | 6087466 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Yersinia pseudotuberculosis YPIII |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010465 |
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| Strand | - |
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| Start bp | 2254591 |
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| End bp | 2255760 |
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| Gene Length | 1170 bp |
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| Protein Length | 389 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 641597093 |
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| Product | tetratricopeptide repeat protein |
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| Protein accession | YP_001720766 |
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| Protein GI | 170024261 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2956] Predicted N-acetylglucosaminyl transferase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.0000000487285 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTAGAAA TGCTGTTTCT GCTGTTGCCC GTTGCTGCCG CCTATGGTTG GTATATGGGG
CGCAGAAGCG CTCAGCAGGA TAAGCAACAG GATGCTAACC GCTTGTCACG TGAATACGTG
GCTGGGGTTA ACTTCCTTCT CTCGAACCAG CAAGATAAAG CAGTCGATCT CTTCCTCGAA
ATGTTGAAAG AAGACAGTTC TACGGTCGAG GCTCATCTTA CTCTGGGTAA TCTGTTCCGC
TCACGCGGCG AAGTTGATCG CGCCATTCGC ATCCATCAAG CCTTGATGGA GAGTGCATCC
CTGACATTTG AACAACGGCT ATTGGCTGTT CAGCAACTCG GTCGGGATTA CATGGCCGCA
GGTTTATATG ATCGGGCAGA AGATATGTTC AACCAATTGG TTGAAGAGCA AGATTTTCGG
CTCGGCGCAT TACAACAATT ACTGATAATT CATCAGGCAA CCAGTGATTG GCATAATGCT
ATTGAAGTTG CGGAAAAATT GGTCAAGATG GGCAAAGATA ATCAGCGTCT GGAAATTGCG
CACTTCTATT GTGAACTTGC GTTGCAAGCA ATGGGCAGTG ACGATCTGGA TAAGGCCATG
GGGTTACTGA AAAAAGCGGC AACGGCGGAT AAACAATGTG CCCGAGTTTC TATTATGCGT
GGCCGTGTGC ATCTCGCTAA AGGTGAGTAT GCCAAAGGCG TTGAAGCGTT GGAGCGAGTA
CTGGAGCAAG ATAAAGAAGT CGTCAGTGAA GCATTACCGA TGCTCAGTGA ATGCTACCAA
CACCTGCAAC AGCCCCAGGC TTGGGCTAAT TTCCTTAAAC GTTGTGTGGA AGATAATACC
GGTGCGGCGG CTGAACTGAT GTTGGCGGAG GTCCTTGAAC AGCAGGAGGG CCATGATGTC
GCGCAAACGT ATATTAACCG CCAATTACAG CGCCACCCAA CGATGCGCGG TTTTTATCGT
CTAATGGATT ACCACTTAGC AGATGCAGAA GAAGGGCGTG CAAAAGAGAG TTTATTGCTA
TTACGGGACA TGGTTGGTGA GCAAATTCGG ACCAAACCAC GTTACCGTTG TCATAAGTGT
GGTTTCACCG CCCACTCACT CTATTGGCAT TGCCCGTCTT GCCGTGCCTG GGCATCAGTT
AAGCCGATCA GAGGATTAGA TGGGCAGTAG
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| Protein sequence | MLEMLFLLLP VAAAYGWYMG RRSAQQDKQQ DANRLSREYV AGVNFLLSNQ QDKAVDLFLE
MLKEDSSTVE AHLTLGNLFR SRGEVDRAIR IHQALMESAS LTFEQRLLAV QQLGRDYMAA
GLYDRAEDMF NQLVEEQDFR LGALQQLLII HQATSDWHNA IEVAEKLVKM GKDNQRLEIA
HFYCELALQA MGSDDLDKAM GLLKKAATAD KQCARVSIMR GRVHLAKGEY AKGVEALERV
LEQDKEVVSE ALPMLSECYQ HLQQPQAWAN FLKRCVEDNT GAAAELMLAE VLEQQEGHDV
AQTYINRQLQ RHPTMRGFYR LMDYHLADAE EGRAKESLLL LRDMVGEQIR TKPRYRCHKC
GFTAHSLYWH CPSCRAWASV KPIRGLDGQ
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