Gene YPK_2018 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYPK_2018 
Symbol 
ID6089459 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pseudotuberculosis YPIII 
KingdomBacteria 
Replicon accessionNC_010465 
Strand
Start bp2249245 
End bp2249550 
Gene Length306 bp 
Protein Length101 aa 
Translation table11 
GC content56% 
IMG OID641597085 
Producthypothetical protein 
Protein accessionYP_001720758 
Protein GI170024253 
COG category[S] Function unknown 
COG ID[COG2879] Uncharacterized small protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.0752714 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGTTAACT CTGGTATTCC GTACCGCTCC CGGCCAATAA CCGGGGGGAA GATTACTCGC 
TGCGTGCCAC TTACTCAGGT CGAAGCAGCC CCAACCACGC TGTGGGCATG GGTACGGCTG
ATTACACATC GGCTGGCGCA AAGCTTCAGG CTGATGGTTG GGGTGCAGGA TTACAGTAAT
TATGTCAATC ATATGCGCCA TAAGCATCCT GACACCCCCC CAATGACTGA GCGGGAGTTC
CATCGTTATT GCCTGGATGC CCGCTTCCCC AGCGAAGGGG GAAAACTGGG GAAATGCCCG
TGTTAG
 
Protein sequence
MVNSGIPYRS RPITGGKITR CVPLTQVEAA PTTLWAWVRL ITHRLAQSFR LMVGVQDYSN 
YVNHMRHKHP DTPPMTEREF HRYCLDARFP SEGGKLGKCP C