Gene YPK_2014 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYPK_2014 
Symbol 
ID6089444 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pseudotuberculosis YPIII 
KingdomBacteria 
Replicon accessionNC_010465 
Strand
Start bp2241900 
End bp2242898 
Gene Length999 bp 
Protein Length332 aa 
Translation table11 
GC content49% 
IMG OID641597081 
ProductNAD-dependent epimerase/dehydratase 
Protein accessionYP_001720754 
Protein GI170024249 
COG category[G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0451] Nucleoside-diphosphate-sugar epimerases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.0242724 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACATTA TGATAACGGG GGCTGCCGGT TTTCTGGGGC GTCGATTGAT TGACGGCTTA 
CTGCAACAGG ATTATCTGAC TGATCAGCAG GGAGAGCCGC GCAATATCAA TAAAATCATT
GCCTATGATG TGCTTCCCTT GATGGAAGTA GAGGATCCAC GGGTTCAGGT TGTTTGTGGT
GACATTGCCG ATCAGAACGG ACTATCGGCG GTATGGGATC GCCAAATTGA CACTATTTTC
CATTTGGCAG CGGTTGTTTC CAGCCAGGCC GAAGACGATT TTGATTTAGG TATGCGCATT
AACGTTGATG CCACTCGCAG CCTATTAGAA TTGGCTCGTC AGTCCGGCCA ATGCCCTAAA
GTGATTATTA CCAGTTCTGT GGCGGTATTC GGCGGTGCAT TGCCGAAAGT TGTTCCTGAT
AATCAGGTGT GGTCACCACA GAGTTCCTAT GGTACGCAAA AAGCATTAAA CGATTTATTG
CTGTCTGATT ACAGCCGCCG TGGGTTTATT GATGGGCGCA GCCTGCGTAT GCCAACCATC
GTGGTGAGAC CCGGTAAACC GAACCGCGCT GCCTCCAGTT TTGCCAGTGG CATTATCCGG
GAACCTCTGC AAGGGCATGA TGCTATTTGC CCCGTCAGTA TGCAAACGCC GTTATGGTTA
CTATCACCCA AAATGGCGAT CGATAATTTG ATTCATGGCC ATGAACTGGA TGCTAGCCAA
CTCCGCTTAG GGCGGGTGAT CAACTTGCCG GGGCTATCCG TTAGTGTACA GCAGATGATT
GATGCTTTGC GCCGTCTCGC GGGTGATGAG GTCGTTGAAC GTATCCAAGT GCAGCGGGAC
CCTTCGATCG AGAGAATTGT TAATTCCTGG CCAGGTGATT TTGAAGCCAG CTATGGGAAA
GCATTAGGTT TTCGTCGCGA TCCGGATTTT GACAGTATTA TTCAGGATTT TATCATTGAG
AATTTGCCTG AATTAGCGGC TGAGAAGCAC TTTATTTAG
 
Protein sequence
MNIMITGAAG FLGRRLIDGL LQQDYLTDQQ GEPRNINKII AYDVLPLMEV EDPRVQVVCG 
DIADQNGLSA VWDRQIDTIF HLAAVVSSQA EDDFDLGMRI NVDATRSLLE LARQSGQCPK
VIITSSVAVF GGALPKVVPD NQVWSPQSSY GTQKALNDLL LSDYSRRGFI DGRSLRMPTI
VVRPGKPNRA ASSFASGIIR EPLQGHDAIC PVSMQTPLWL LSPKMAIDNL IHGHELDASQ
LRLGRVINLP GLSVSVQQMI DALRRLAGDE VVERIQVQRD PSIERIVNSW PGDFEASYGK
ALGFRRDPDF DSIIQDFIIE NLPELAAEKH FI