Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YPK_2009 |
Symbol | |
ID | 6087643 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pseudotuberculosis YPIII |
Kingdom | Bacteria |
Replicon accession | NC_010465 |
Strand | - |
Start bp | 2237267 |
End bp | 2238160 |
Gene Length | 894 bp |
Protein Length | 297 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 641597076 |
Product | AraC family transcriptional regulator |
Protein accession | YP_001720749 |
Protein GI | 170024244 |
COG category | [K] Transcription |
COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.532444 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATGAGTG AAGACATATT GTTTATAGAA GAATTAATCG AGTGGATTGA AATAAATTTA GAAAAAAGGC CGACATTAGA CGATGTGGCA AAGATCTCCG GATATTCAAA ATGGCATTTA CAACGGAAGT TTAAGAGTAT CGTTGGGCTA CAACTGGCAT CCTATATCCG TGGGCGAGTG TTGACCCGAG CTGCGGTTGC GTTGCGTATA TCAAGAAAGC CTATTATTAC TATCTCTGAT GAATTGGGAT TTGACTCGCA ACAGACCTTT ACACGTACCT TTAAAAAACG GTTTGGCGTG ACACCAAACA GCTTCCGCCA GATGAACCAT TGGGATGTTC AGGGGATGAT CCCTCGCTTC GGATTCTACG AAAATTATAC GCCGGAAATC AAGCAGGTAA CGTTACCTGG AAAGGAATTA GTCGGTTTCA CCCGGCGTCT GGATTTCGAA GAGTATAATG GTTGTGCTGT GCAGCGCTCT TCCTGTATGG CGATGAAAGA CGAGATCCTG CTTGATTTCT TTAAAGAGGT CAACTTTGCC TGTCAGCGGA TCTACTCTTT GTTTTCTGTT AAGGATGTTG ATGGTCAACA GGGGCAGAAG AGCGTTTATT ACTCAACGGC GATAGACAAA GAGAGAAAGC ATGAGATTCA AGGGAGCCGA GAGATCGATC ACATCGCGAT TCCTGAAGGT GAATTTTTGT CTATCTCCCA TCAGGGGAGC GCTAAAGAGT GTGTAAAATT CGCAACTTAC TTGTTTAACA ACGTGTTACC AAAGTTACGT GATGAAGTTG GTCGTGGGAT TGAGATGGAA GTTATTGAGA TAGACCATTG TCATGCAGAA TCGAAACTGC GTGATATTTC CGTAGTCTAT CGTTATCTGA TGGCAGTGAA TTAA
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Protein sequence | MMSEDILFIE ELIEWIEINL EKRPTLDDVA KISGYSKWHL QRKFKSIVGL QLASYIRGRV LTRAAVALRI SRKPIITISD ELGFDSQQTF TRTFKKRFGV TPNSFRQMNH WDVQGMIPRF GFYENYTPEI KQVTLPGKEL VGFTRRLDFE EYNGCAVQRS SCMAMKDEIL LDFFKEVNFA CQRIYSLFSV KDVDGQQGQK SVYYSTAIDK ERKHEIQGSR EIDHIAIPEG EFLSISHQGS AKECVKFATY LFNNVLPKLR DEVGRGIEME VIEIDHCHAE SKLRDISVVY RYLMAVN
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