| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YPK_2004 |
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| Symbol | |
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| ID | 6088736 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Yersinia pseudotuberculosis YPIII |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010465 |
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| Strand | - |
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| Start bp | 2230676 |
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| End bp | 2232823 |
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| Gene Length | 2148 bp |
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| Protein Length | 715 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 641597071 |
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| Product | type I secretion system ATPase |
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| Protein accession | YP_001720744 |
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| Protein GI | 170024239 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG2274] ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain |
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| TIGRFAM ID | [TIGR01846] type I secretion system ABC transporter, HlyB family |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAAAATC ATGTTCATTC CGCGCTGATA TGTGCATCCA GACTGATTCG GTTGGCCGGG
TTAAATCCAA TGGATATCGA GACATTTAGC CAAAAGGTCG CCATAGACAC CTCAGTAAAA
ACAACGCTAG CGTCTCTTCA GCGTTATATC GTTCAATTTT CACAAACAGC TTCTGTCCGT
TTTAAAATAC GTAAGCAAGC ATTGGAAAAA ATAAGGCAGG AGCAGTTACC GCTGGCATTT
CGTGACCGTC AGGGGAATTT TATCTTGCTG GCGCGGATGA ATGAACAACA AGTGTTATTA
CAGTACGCTG ATGATAAAAA ACCACAAATG TTAAGTTATC AATCACTTGC TGACATGTGG
GGTGGAATGA TCTTATGCTG TAGTCATTCG CGCTTTGATA TTCGCTGGTT TATCCCGCCA
CTACGTCGCC ATCGTAAGCC ATTAATGCAA GTCCTATTGT TATCATTATT GCTGCAATTC
CTAGCGTTGA TCTCCCCTCT CTTTTTTCAA GTTATCATGG ACAAAGTACT CGTTCATCAT
GCATTAACCA CACTGGAAGT GCTAATCTTC ATCTTAGTCA TTGTCGGTGT GTATGAGGTT
ATATTAAAAG GCTTACGAGA ATATATTTTC ACGCATACGA CAACACGAGT GGATATATTA
TTAGGCGGGA AGTTGTTTCA ACATTTAATC AGGTTGCCGT TAAGTTACTT TAAACAACGT
CATGTCGGTA ATATTGTTGC CAGAGTCCGT GAGTTAGATA ATATCCGTGA TTTCATCACG
GGTTCGGCCC TGACATTATG TGTTGATGTG GTTTTTACCC TCGTGTTGTT TATTGTTATG
TGGTGTATAT CCCCGTTATT AACCTTAATA ATACTGAGCA CGTTGCCTTT TTATCTGTTA
TTGGCCGTGA TGACCACTCG GCCGTTGCAA AAAAAAGTAG AAGCTCTCTG TGGTTTTGCC
GCGCAAAACG GCGCGTTTTT GACTGAAACG GTGTCTGGGG TGGAAACCGT AAAAAGTTTG
GCGCTGGAGC CACGGATGCG CCAGCGCTGG GAAAGCCAAA CTCGTGATTT TGCTCAGGCT
AATTTTCAGG TACAAAATTT GCAAAATCTC AGTAGCCAAG CGGCTCAACT CTTGCAAAAG
GTGGCTGGCG CACTGGTGAT CGTGATAGGT GCGTATCACG TTATGTCTGT ACAGCTCAGT
ATTGGTCAGT TGATTGCATT TAATATGTTG GCACTACAGG CATTAATGCC GATGAGTAAA
CTGGTTGATT TATGGCAGCA GAGCATCCGT GCTCAGGTTG GGCTGAAATT AATATCAGAT
ATTCTAAGCT TGCCGGTTGA ACCGGAGGCA GATCCGGCGG CCCCGCACCC TGCGATTAGC
GGCAATATCC TACTAAAAAA TGTGGCCTTC CGTTATCGCC CCGATCTTGA TCCTGTCTTA
CATGATTTAA ACTTATCTAT CTGCGCGGGT GAAAATATAG GGTTGGTGGG GCCGTCAGGA
TCGGGGAAAA GCACCGTGGC CCGGTTATTA CAACGGCTCT ATAACACCGA ACAAGGGGTC
ATTACGATAG ATGGTTATCC GATCAACCAT TTATCACCAG AATATTTACG GCGACAAGTG
GGGGTGGTGA TGCAGGAAAG CTATCTGTTT AACCGCACCG TGCGAGAAAA TATTGCCCAT
TCACGGCCAA CAGCCACCTT GACCGAGGTG GTCAATGCCG CCAGTTTAGC GGGTGCTAAC
GCCTTTATTT TGGCGCTACC TTTAGGGTAT GACACGGTTT TATCTGAAGG TGGTTCATCC
TTATCTGGTG GGCAACGTCA ACGTATTGCC ATTGCTCGCA CTCTGCTCGC GAATCCCCGG
ATCTTAATTT TTGATGAAGC GACCAGCGCA CTGGATGATG AGTCTCAGTC GGAGATTCAG
AAAAACATGG CCCGCATTAT CGCCAATCGC ACGGTTATTA CGATTGCCCA TCGCCTATCG
ACCGTTCGTC ACTGCCACCG TATTGCCGTG ATAACACAAG GCCGAGTCAC CGAACTTGCC
AGCCATGACG AATTACTGCA ATTAAACGGC AGTTACGCTC GGCTTTGGCA ACAACAAGTT
CATTTTAACC AAAACAAGTC CACCTTAACT AAAACAAGCC CACTTTAA
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| Protein sequence | MENHVHSALI CASRLIRLAG LNPMDIETFS QKVAIDTSVK TTLASLQRYI VQFSQTASVR
FKIRKQALEK IRQEQLPLAF RDRQGNFILL ARMNEQQVLL QYADDKKPQM LSYQSLADMW
GGMILCCSHS RFDIRWFIPP LRRHRKPLMQ VLLLSLLLQF LALISPLFFQ VIMDKVLVHH
ALTTLEVLIF ILVIVGVYEV ILKGLREYIF THTTTRVDIL LGGKLFQHLI RLPLSYFKQR
HVGNIVARVR ELDNIRDFIT GSALTLCVDV VFTLVLFIVM WCISPLLTLI ILSTLPFYLL
LAVMTTRPLQ KKVEALCGFA AQNGAFLTET VSGVETVKSL ALEPRMRQRW ESQTRDFAQA
NFQVQNLQNL SSQAAQLLQK VAGALVIVIG AYHVMSVQLS IGQLIAFNML ALQALMPMSK
LVDLWQQSIR AQVGLKLISD ILSLPVEPEA DPAAPHPAIS GNILLKNVAF RYRPDLDPVL
HDLNLSICAG ENIGLVGPSG SGKSTVARLL QRLYNTEQGV ITIDGYPINH LSPEYLRRQV
GVVMQESYLF NRTVRENIAH SRPTATLTEV VNAASLAGAN AFILALPLGY DTVLSEGGSS
LSGGQRQRIA IARTLLANPR ILIFDEATSA LDDESQSEIQ KNMARIIANR TVITIAHRLS
TVRHCHRIAV ITQGRVTELA SHDELLQLNG SYARLWQQQV HFNQNKSTLT KTSPL
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