| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YPK_1996 |
|---|
| Symbol | |
|---|
| ID | 6087922 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Yersinia pseudotuberculosis YPIII |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010465 |
|---|
| Strand | - |
|---|
| Start bp | 2218296 |
|---|
| End bp | 2219228 |
|---|
| Gene Length | 933 bp |
|---|
| Protein Length | 310 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | 641597063 |
|---|
| Product | DNA-binding transcriptional regulator AraC |
|---|
| Protein accession | YP_001720736 |
|---|
| Protein GI | 170024231 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTATCAAC GCATGGTTCA GGAACCGCAA CCCAATCCTT TGCTACCAGG CTACACGTTC
AATGCTTATC TGGTCGCAGG ATTAACCCCG ATTCTGGCTG ACGGCCCACT CGATTTCTTC
ATTGATCGGC CTGGCGGCAT GAAGGGCTAT ATTCTGAATT TGACCATTAA GGGGCAGGGG
AAGATTTTCG ATGGTGAAAA TACCATCTAC AGTAATCCTG GTGATTTACT GTTGTTCCCA
CCTAAGTCGC CTCACCATTA TGGTCGTTCA CCGAATAGTG ATTGTTGGTA TCACCGCTGG
GTCTATTTCC GACCACGGGC TTATTGGGCC GATTGGTTGG AATGGCACAG TAAAACCCAT
GAGGTAGGGC GTTTATCTTT ACCTAACAAT AACTTAATGC TGGAGTTTGA CCGCTTATTT
GCCAATATTG AGCAGACACA GAAATCGGGG CGGCGCTTCG GTGAAGAGTT GGGTATGAAT
TTGCTCGAGC GGTTACTGCT ACGAGCAATG GAAGAAGACC CACTTAGTCC ACAACGTATT
ATGGATCCAC GTATTATTGA GGCCTGTCAA TTTATTACCG GAAATCTGGC AGGGGAATTA
CGTATTGACG AAGTTGCCCG CCATGTTTGC CTATCACCAT CACGCTTAGC GCATTTATTC
CGTGAACAGG TTGGCATTAA TATATTACGT TGGCGTGAGG ATCAGCGGGT GATCCGGGCG
AAATTATTAC TGCAAACGAC CCAAGAGCCA ATTGCGACCA TTGGCCGGGT GGTAGGCTAT
GATGACCAAC TCTATTTTTC CCGTGTTTTC CGTAAACGAG TGGGGGTCAG CCCCAGCGAT
TTCAGGCGGC GCAGTATCGA AACTAACTAT CCACAACGTA CTTTTCGTCC AGCGGACTGG
CAGGATAATC AGGGGGCATT GGTGCGGGTT TAA
|
|---|
| Protein sequence | MYQRMVQEPQ PNPLLPGYTF NAYLVAGLTP ILADGPLDFF IDRPGGMKGY ILNLTIKGQG
KIFDGENTIY SNPGDLLLFP PKSPHHYGRS PNSDCWYHRW VYFRPRAYWA DWLEWHSKTH
EVGRLSLPNN NLMLEFDRLF ANIEQTQKSG RRFGEELGMN LLERLLLRAM EEDPLSPQRI
MDPRIIEACQ FITGNLAGEL RIDEVARHVC LSPSRLAHLF REQVGINILR WREDQRVIRA
KLLLQTTQEP IATIGRVVGY DDQLYFSRVF RKRVGVSPSD FRRRSIETNY PQRTFRPADW
QDNQGALVRV
|
|---|
| |