Gene YPK_1995 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYPK_1995 
Symbol 
ID6087433 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pseudotuberculosis YPIII 
KingdomBacteria 
Replicon accessionNC_010465 
Strand
Start bp2217119 
End bp2218168 
Gene Length1050 bp 
Protein Length349 aa 
Translation table11 
GC content50% 
IMG OID641597062 
Productputative oxidoreductase 
Protein accessionYP_001720735 
Protein GI170024230 
COG category[R] General function prediction only 
COG ID[COG0673] Predicted dehydrogenases and related proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCTGATA AGATAAAAGT AGGTTTACTG GGCTACGGTT ATGCCAGTAA AACGTTTCAT 
GCGCCGTTAA TTATGGGCAC ACCGGGCTTA GAACTGGCTG GAGTTTCCAG CAGTGATGCC
AGTAAAGTGC ATGCCGATTG GCCTGCAATA CCGGTAGTAT CTGACCCTCA GATGTTATTC
AATGATCCCT CTATCGATCT CATTGTTATT CCCACGCCCA ATGATACCCA CTTCCCATTA
GCGCAGAGCG CACTGGCTGC CGGTAAACAT GTGGTAGTTG ATAAACCCTT TACCGTGACG
TTGTCACAAG CAAACGCGTT AAAAGAGCAC GCTGATGATG CAGGTTTACT GTTATCAGTA
TTCCACAATC GCCGTTGGGA CAGTGACTTC CTGACGTTAA AAACGTTACT GGCCGAAGGC
TCGCTGGGGA ACGTTGTCTA TTTCGAATCT CACTTTGATC GCTACCGCCC GGAAATCCGT
CAACGCTGGC GTGAACAAGC CGGTGCGGGA GGGGGCATCT GGTATGATTT AGGGCCACAT
TTACTGGACC AAGCGTTACA ACTGTTTGGT CTGCCAGAAA CGTTGAATGT CGATCTGGGC
ATGTTGCGCC CAGGCTCTCA ATCTGTTGAC TATTTCCACG CGGTTCTCAG CTATCCGGGG
CAACGCGTTG TACTGCATAG CACGGTATTG GCTGCGGCAG AAACGGCGCG TTATATTGTG
CACGGTACGC AGGGCAGCTA TATCAAGTTT GGTGTGGATC CACAGGAAGA CCGTTTGAAA
GCCGGTGAGC GTTTACCACA GGCTGACTGG GGCTACGATA TGCGTGATGG AATCGTGACA
CTGTCACATG ATAATGTGCT TACCGAGAAA CCGCTACTGA CGCTGCCGGG GAATTATCCT
GCGTACTATG CCGGTATCCG TGATGCTATT TGGGGCACTG CGCCTAATCC GGTTCCAGCC
ACTGAAGCGA TTAAAGTCAT GGAGTTGATT GAGTTGGGTA TTGCTTCAGA TCAACAGAAA
AAAGCACTGC CGATCATTGC TAAAAATTGA
 
Protein sequence
MADKIKVGLL GYGYASKTFH APLIMGTPGL ELAGVSSSDA SKVHADWPAI PVVSDPQMLF 
NDPSIDLIVI PTPNDTHFPL AQSALAAGKH VVVDKPFTVT LSQANALKEH ADDAGLLLSV
FHNRRWDSDF LTLKTLLAEG SLGNVVYFES HFDRYRPEIR QRWREQAGAG GGIWYDLGPH
LLDQALQLFG LPETLNVDLG MLRPGSQSVD YFHAVLSYPG QRVVLHSTVL AAAETARYIV
HGTQGSYIKF GVDPQEDRLK AGERLPQADW GYDMRDGIVT LSHDNVLTEK PLLTLPGNYP
AYYAGIRDAI WGTAPNPVPA TEAIKVMELI ELGIASDQQK KALPIIAKN