| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YPK_1988 |
|---|
| Symbol | |
|---|
| ID | 6088366 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Yersinia pseudotuberculosis YPIII |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010465 |
|---|
| Strand | - |
|---|
| Start bp | 2210847 |
|---|
| End bp | 2211596 |
|---|
| Gene Length | 750 bp |
|---|
| Protein Length | 249 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | 641597057 |
|---|
| Product | GntR family transcriptional regulator |
|---|
| Protein accession | YP_001720730 |
|---|
| Protein GI | 170024225 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG2188] Transcriptional regulators |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAATACAT CTCCAGCACC TGAATTTCAC CTTGATAAAT CCAGTAGATT GCCACTCTAT
TTGCAACTGG TTAATTCCAT AAAATCTGCA ATTACTGAAG GGCGTTTACA TGCAGGTGAT
GTTTTGCCAC CAGAGCGGGA ACTGGCAGAG ATGCTGGATA TTGCGCGGGG GACTGTTCGT
AAAGCCTTAC TACAGCTACT TGAAGGCGGC GTTCTTGTAC GCAATCAGGG CGTTGGTACA
TTTATTGCGC CGCATGTACG CCCGTCGTTG CCGCTACTGG AGAGTTTTAG TGAAATGGCT
ACGGCCAGCG GAGGCACGGC GCAAAGTGAA CTGTTGGGAT ATCTGCGGCA CCCATCCGCA
CTGGAAGAAC GTAGTGTCTT GCAAATGACA CAGGATAATG GCGACGTCGT GGAACTGACC
AGACTCAGAA AGGTTAATGG TATTACTGTT TCCCTCCAGA TTGCGATTTT ACCGGCGCAT
TTTCTGGATA ACATCAGTGA ACTCGATGAG TCTTTGTATT GGCATCTGGA AAAAAAGGGA
GCACAAGTAT TGCGGGCAAC CCAGCACTTC AGCGCAGCAG TTACGGACAG TACATTGGCG
CACTACTTGG GCACCGATGA GTATGAGCCC GTTTTACTAG TAACCCGAAC AGGCTTTACT
CATAACGATC GGCCTGTTGA ATATACCCGA ACCTGGTATC TTAACGATTA CTGTGATTTT
ACGATTGAGC TACACCGTAA AGATCTATAA
|
|---|
| Protein sequence | MNTSPAPEFH LDKSSRLPLY LQLVNSIKSA ITEGRLHAGD VLPPERELAE MLDIARGTVR
KALLQLLEGG VLVRNQGVGT FIAPHVRPSL PLLESFSEMA TASGGTAQSE LLGYLRHPSA
LEERSVLQMT QDNGDVVELT RLRKVNGITV SLQIAILPAH FLDNISELDE SLYWHLEKKG
AQVLRATQHF SAAVTDSTLA HYLGTDEYEP VLLVTRTGFT HNDRPVEYTR TWYLNDYCDF
TIELHRKDL
|
|---|
| |