Gene YPK_1985 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYPK_1985 
SymbolfumC 
ID6087470 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pseudotuberculosis YPIII 
KingdomBacteria 
Replicon accessionNC_010465 
Strand
Start bp2205990 
End bp2207387 
Gene Length1398 bp 
Protein Length465 aa 
Translation table11 
GC content48% 
IMG OID641597054 
Productfumarate hydratase 
Protein accessionYP_001720727 
Protein GI170024222 
COG category[C] Energy production and conversion 
COG ID[COG0114] Fumarase 
TIGRFAM ID[TIGR00979] fumarate hydratase, class II 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCAACTA CCCGCAGTGA AAAGGATTCT ATGGGGTCTA TCGATGTACC TGCAAACCAA 
TTATGGGGGG CGCAAACTCA ACGTTCATTG GCGCATTTTC GAATTTCACA AGAAAAAATG
CCAACAGAGC TAATTCATGC ATTGGCTCTG ACCAAACGAG CGGCAGCTCA AGTGAATATG
GACCTAGGCT TGCTGCCAGC CGAGCGTGCA AAAGCGATTA TGCGGGCCGC AGATGAAGTC
CTGAATGACG CTCATCCAAC CGAGTTCCCT CTCGCCATCT GGCAAACCGG GTCGGGTACT
CAGACGAATA TGAATATGAA TGAGGTACTG GCAAACCGTG CGAGTGAGTT GCTCGGGGGG
GCGCGGGGGA ATAACCGTTT GGTTCATCCC AATGATGATG TCAATAAAAG CCAAAGTTCA
AATGATGTCT TCCCAACGGC GATGCATGTC GCTGCAGTGA TGGGGGTGAG TGAACATCTT
CTTCCTGAAC TGAAGGTGTT ACAGAAAACC TTGGCCGACA AAGCAGAAGC TTATCGCGAT
ATTGTAAAAA TTGGCCGTAC ACATTTACAA GATGCGACCC CTTTAACGTT GGGGCAGGAA
ATTTCCGGGT GGGCGGCAAT GTTATCTCAC AGTGTGCGGC ATATTGAGGC GACCCTTCCT
CACCTGTGTG AATTAGCGCT TGGGGGAACA GCGGTGGGGA CTGGCCTCAA TACGCATCCT
GAATATGCTG TACGAGTAGC TAATGAAATA GCCACACTGA CACGCCAACC GTTTATCACT
GCCCCGAATA AATTTGAATC ATTGGGAACC TGCGATGCAT TGGTTCATGG TCACGGTGCG
CTAAAAGGCT TAGCGGCATC CCTGATGAAG ATTGCCAATG ATGTCCGTTG GTTATCATCA
GGCCCTCGCT GTGGTATTGG CGAAATATCT ATTCCGGAAA ATGAGCCAGG CAGTTCTATC
ATGCCAGGCA AAGTGAATCC AACACAGTGT GAAGCGATGA CCATGCTATG TGCTCAAGTT
ATGGGTAATG ATGTGGCTAT CAATATCGGT GGGGCGTCCG GCAACTTTGA ATTAAACGTG
TTCCGTCCAT TGGTCATCCA TAACTTCCTG CAATCTGTTC GTTTGTTGGC TGATGGAATG
CGTGGTTTTA ATGAGCACTG CGCTTTGGGA ATTGAACCTA ACCGCGACCG TATTACGCAA
TTGCTCAATG AATCGCTGAT GTTAGTTACC GCGCTCAATA CCCATATTGG CTACGATAAA
GCAGCTGAAA TCGCCAAAAA GGCGCATAAA GAGGGGCTAA CATTGAAAGC AGCAGCTATG
GCATTGGGTT ATCTTACCGA TGCAGAGTTT GATGAATGGG TTCGACCGGA AGATATGGTC
GGCAGTATGA AGAAATAG
 
Protein sequence
MATTRSEKDS MGSIDVPANQ LWGAQTQRSL AHFRISQEKM PTELIHALAL TKRAAAQVNM 
DLGLLPAERA KAIMRAADEV LNDAHPTEFP LAIWQTGSGT QTNMNMNEVL ANRASELLGG
ARGNNRLVHP NDDVNKSQSS NDVFPTAMHV AAVMGVSEHL LPELKVLQKT LADKAEAYRD
IVKIGRTHLQ DATPLTLGQE ISGWAAMLSH SVRHIEATLP HLCELALGGT AVGTGLNTHP
EYAVRVANEI ATLTRQPFIT APNKFESLGT CDALVHGHGA LKGLAASLMK IANDVRWLSS
GPRCGIGEIS IPENEPGSSI MPGKVNPTQC EAMTMLCAQV MGNDVAINIG GASGNFELNV
FRPLVIHNFL QSVRLLADGM RGFNEHCALG IEPNRDRITQ LLNESLMLVT ALNTHIGYDK
AAEIAKKAHK EGLTLKAAAM ALGYLTDAEF DEWVRPEDMV GSMKK