Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YPK_1985 |
Symbol | fumC |
ID | 6087470 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pseudotuberculosis YPIII |
Kingdom | Bacteria |
Replicon accession | NC_010465 |
Strand | - |
Start bp | 2205990 |
End bp | 2207387 |
Gene Length | 1398 bp |
Protein Length | 465 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 641597054 |
Product | fumarate hydratase |
Protein accession | YP_001720727 |
Protein GI | 170024222 |
COG category | [C] Energy production and conversion |
COG ID | [COG0114] Fumarase |
TIGRFAM ID | [TIGR00979] fumarate hydratase, class II |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCAACTA CCCGCAGTGA AAAGGATTCT ATGGGGTCTA TCGATGTACC TGCAAACCAA TTATGGGGGG CGCAAACTCA ACGTTCATTG GCGCATTTTC GAATTTCACA AGAAAAAATG CCAACAGAGC TAATTCATGC ATTGGCTCTG ACCAAACGAG CGGCAGCTCA AGTGAATATG GACCTAGGCT TGCTGCCAGC CGAGCGTGCA AAAGCGATTA TGCGGGCCGC AGATGAAGTC CTGAATGACG CTCATCCAAC CGAGTTCCCT CTCGCCATCT GGCAAACCGG GTCGGGTACT CAGACGAATA TGAATATGAA TGAGGTACTG GCAAACCGTG CGAGTGAGTT GCTCGGGGGG GCGCGGGGGA ATAACCGTTT GGTTCATCCC AATGATGATG TCAATAAAAG CCAAAGTTCA AATGATGTCT TCCCAACGGC GATGCATGTC GCTGCAGTGA TGGGGGTGAG TGAACATCTT CTTCCTGAAC TGAAGGTGTT ACAGAAAACC TTGGCCGACA AAGCAGAAGC TTATCGCGAT ATTGTAAAAA TTGGCCGTAC ACATTTACAA GATGCGACCC CTTTAACGTT GGGGCAGGAA ATTTCCGGGT GGGCGGCAAT GTTATCTCAC AGTGTGCGGC ATATTGAGGC GACCCTTCCT CACCTGTGTG AATTAGCGCT TGGGGGAACA GCGGTGGGGA CTGGCCTCAA TACGCATCCT GAATATGCTG TACGAGTAGC TAATGAAATA GCCACACTGA CACGCCAACC GTTTATCACT GCCCCGAATA AATTTGAATC ATTGGGAACC TGCGATGCAT TGGTTCATGG TCACGGTGCG CTAAAAGGCT TAGCGGCATC CCTGATGAAG ATTGCCAATG ATGTCCGTTG GTTATCATCA GGCCCTCGCT GTGGTATTGG CGAAATATCT ATTCCGGAAA ATGAGCCAGG CAGTTCTATC ATGCCAGGCA AAGTGAATCC AACACAGTGT GAAGCGATGA CCATGCTATG TGCTCAAGTT ATGGGTAATG ATGTGGCTAT CAATATCGGT GGGGCGTCCG GCAACTTTGA ATTAAACGTG TTCCGTCCAT TGGTCATCCA TAACTTCCTG CAATCTGTTC GTTTGTTGGC TGATGGAATG CGTGGTTTTA ATGAGCACTG CGCTTTGGGA ATTGAACCTA ACCGCGACCG TATTACGCAA TTGCTCAATG AATCGCTGAT GTTAGTTACC GCGCTCAATA CCCATATTGG CTACGATAAA GCAGCTGAAA TCGCCAAAAA GGCGCATAAA GAGGGGCTAA CATTGAAAGC AGCAGCTATG GCATTGGGTT ATCTTACCGA TGCAGAGTTT GATGAATGGG TTCGACCGGA AGATATGGTC GGCAGTATGA AGAAATAG
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Protein sequence | MATTRSEKDS MGSIDVPANQ LWGAQTQRSL AHFRISQEKM PTELIHALAL TKRAAAQVNM DLGLLPAERA KAIMRAADEV LNDAHPTEFP LAIWQTGSGT QTNMNMNEVL ANRASELLGG ARGNNRLVHP NDDVNKSQSS NDVFPTAMHV AAVMGVSEHL LPELKVLQKT LADKAEAYRD IVKIGRTHLQ DATPLTLGQE ISGWAAMLSH SVRHIEATLP HLCELALGGT AVGTGLNTHP EYAVRVANEI ATLTRQPFIT APNKFESLGT CDALVHGHGA LKGLAASLMK IANDVRWLSS GPRCGIGEIS IPENEPGSSI MPGKVNPTQC EAMTMLCAQV MGNDVAINIG GASGNFELNV FRPLVIHNFL QSVRLLADGM RGFNEHCALG IEPNRDRITQ LLNESLMLVT ALNTHIGYDK AAEIAKKAHK EGLTLKAAAM ALGYLTDAEF DEWVRPEDMV GSMKK
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