Gene YPK_1984 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYPK_1984 
Symbol 
ID6087987 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pseudotuberculosis YPIII 
KingdomBacteria 
Replicon accessionNC_010465 
Strand
Start bp2204936 
End bp2205910 
Gene Length975 bp 
Protein Length324 aa 
Translation table11 
GC content43% 
IMG OID641597053 
ProductDNA replication terminus site-binding protein 
Protein accessionYP_001720726 
Protein GI170024221 
COG category 
COG ID 
TIGRFAM ID[TIGR02648] DNA replication terminus site-binding protein 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.395704 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTATGTTG TAACTAAGCC GCCTTATTTA GAAAAGAATA TGAACAAGTA TGATTTGATA 
GAACGAATGA ATACTCGCTT TGCTGAGTTA GAAGTAACAC TTCATCAACT CCACCAGCAA
TTGGACGATT TACCTCTAAT TGCTGCCAGA GTATTTTCTC TCCCTGAAAT AGAAAAAGGC
ACTGAGCATC AACCCATTGA GCAAATTACC GTCAATATAA CCGAGGGTGA ACACGCCAAA
AGGTTGGGGT TACAACATTT CCAACGATTA TTTCTTCATC ACCAAGGGCA GCATGTTAGC
AGTAAAGCAG CACTACGCTT ACCTGGCGTA CTCTGCTTCT CCGTGACCGA CAAAGAACTC
ATTGAATGCC AAGATATAAT AAAAAAAACC AATCAGTTAA AAGCTGAGTT AGAACATATT
ATTACTGTGG AATCAGGCTT ACCCAGCGAA CAACGCTTTG AATTTGTTCA CACACACTTA
CATGGCCTGA TAACCCTGAA TACCTACCGC ACCATTACCC CATTAATCAA CCCCAGTTCA
GTGCGCTTTG GCTGGGCCAA CAAACACATT ATTAAAAATG TGACTCGCGA AGATATATTG
CTACAGCTAG AAAAAAGCCT GAATGCTGGC CGAGCTGTTC CTCCATTTAC ACGTGAGCAA
TGGAGGGAAC TGATTAGCTT GGAAATAAAT GATGTGCAGC GTTTGCCAGA AAAGACACGG
CTGAAAATTA AAAGGCCCGT AAAAGTGCAG CCCATCGCAA GAGTATGGTA TCAAGAACAA
CAAAAACAGG TACAACACCC CTGCCCCATG CCCCTGATTG CGTTCTGTCA GCGTCAGTCA
GGGGCCGAGC TACCGAAATT AGGCGAGTTG ACCGATTATG ATGTGAAGCA TATCAAGCAT
AAATATAAGC CAGATGCGAA ACCGCTACGT TTGCTGGTAC CGCGCTTGCA TCTTTATGTC
GAACTGGAAC CGTAA
 
Protein sequence
MYVVTKPPYL EKNMNKYDLI ERMNTRFAEL EVTLHQLHQQ LDDLPLIAAR VFSLPEIEKG 
TEHQPIEQIT VNITEGEHAK RLGLQHFQRL FLHHQGQHVS SKAALRLPGV LCFSVTDKEL
IECQDIIKKT NQLKAELEHI ITVESGLPSE QRFEFVHTHL HGLITLNTYR TITPLINPSS
VRFGWANKHI IKNVTREDIL LQLEKSLNAG RAVPPFTREQ WRELISLEIN DVQRLPEKTR
LKIKRPVKVQ PIARVWYQEQ QKQVQHPCPM PLIAFCQRQS GAELPKLGEL TDYDVKHIKH
KYKPDAKPLR LLVPRLHLYV ELEP