Gene YPK_1982 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYPK_1982 
Symbol 
ID6087401 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pseudotuberculosis YPIII 
KingdomBacteria 
Replicon accessionNC_010465 
Strand
Start bp2202345 
End bp2203259 
Gene Length915 bp 
Protein Length304 aa 
Translation table11 
GC content46% 
IMG OID641597051 
ProductLysR family transcriptional regulator 
Protein accessionYP_001720724 
Protein GI170024219 
COG category[K] Transcription 
COG ID[COG0583] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTATTG AACTAAGACA TTTGCGGTAT TTTATTGCTG TCGCGGAAGA GCTGCACTTT 
GGCCGGGCAG CTGAACGCTT GCATATTTCT CAACCCCCCC TGAGCCAGCA AATCCAAATC
CTTGAAGAAC AGATTGGGGC CCGCTTATTG GCACGAAATA AGCGTAATAT CAGTCTCACC
CAAGCGGGAA AGCTCTTTTT AAAAGAGTCC TACCAAATTT TGGCACAGGT CAACTCTGCA
ACTGAGAAAG CAGCCTGTCT ACATCGTGGG GAGTCGGGAG TGCTGACGAT CGGTTTCACT
TCATCGGCAC CATTGATCAA TGTTGTTTCT AAGAATTTGC GTACTTTTCG GCAAATATAT
CCACAAGTAC ATATAAAAAT GCAGGAGGTA AGTACCAAAC AGCAAATTGA AGCATTACTC
GACGGGCGGT TAGATCTAGG TATTATGCGT AATACTCGGC TGCCTGAGGC ATTACAATAT
CGATTGCTAT TACGTGAACC TCTGGTCGCT GTCGTCCATG AAGATCATCC ATTAGCCTCC
CTACCAAATG GCAGTGTCAA ATTTAGCTCA CTGGACAAAC AACCTTTTGT CTTCTTTTCA
CGTGAAGTGG GGACTGCACT TTATGACGAA TTCTTTACCT TATTAACCCG CGCGGGGATC
ACACCTTATA TTACGCAGGA GGTCGGCGAG GCGATGACCA TCATAGGCTT GGTATCATCT
GGTCTGGGGG TTTCAATCCT GCCCGCCTCG TTTAGGCGAG TAAACGTTGA TGGTGTCAAA
TACTTATCAC TGGACGAAGC TGATGCGACG ACAGAAATGT GGTTGGTTAA TCATAAGCAT
CGTCCGATGC CCCCCCCTGC AGAAGCATTG CTCCGTTTGA TGATGGCTGA TATTCAAGCT
GCTCCGTATA AATAG
 
Protein sequence
MSIELRHLRY FIAVAEELHF GRAAERLHIS QPPLSQQIQI LEEQIGARLL ARNKRNISLT 
QAGKLFLKES YQILAQVNSA TEKAACLHRG ESGVLTIGFT SSAPLINVVS KNLRTFRQIY
PQVHIKMQEV STKQQIEALL DGRLDLGIMR NTRLPEALQY RLLLREPLVA VVHEDHPLAS
LPNGSVKFSS LDKQPFVFFS REVGTALYDE FFTLLTRAGI TPYITQEVGE AMTIIGLVSS
GLGVSILPAS FRRVNVDGVK YLSLDEADAT TEMWLVNHKH RPMPPPAEAL LRLMMADIQA
APYK