Gene YPK_1980 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYPK_1980 
Symbol 
ID6088494 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pseudotuberculosis YPIII 
KingdomBacteria 
Replicon accessionNC_010465 
Strand- 
Start bp2200057 
End bp2200725 
Gene Length669 bp 
Protein Length222 aa 
Translation table11 
GC content43% 
IMG OID641597049 
Productputative dithiobiotin synthetase 
Protein accessionYP_001720722 
Protein GI170024217 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0132] Dethiobiotin synthetase 
TIGRFAM ID[TIGR00347] dethiobiotin synthase 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTAACGC GTTTATTTGT GACAGGTACC GACACTGCTG TTGGTAAAAC CGTCGTGTCA 
CGGGCTTTAC TTCAAGCCTT AAGCCAAAAT GGCAGAACCG CAGTAGGCTA TAAACCTGTT 
GCGACAGAAA GCAAAGAGAC CTCGGAAGGG TTGCGTAATC AAGATGCGTT GATCTTGCAG 
GCGTCATCAT CCATTGAGTT AAATTATCAG GAGGTAAATC CATATCCATT ACAAGGTGAT 
GTTATTCATG CCTGTACAGA TACCCTGATT AATTATGAAA AGATGACCGA AGGATTGCAG 
TGTTTATCGG CTAAAGCAGA TACCGTAATC GTTGAAGGCT GCGGTGGGTG GAAGGTTATG 
ATGAATGACC AACGCTTTTA CTCTGACTGG GTGGTACAAG AACAATTACC CGTTATTTTA 
GTCGTCGGAA TTAAATTAGG CTGTATCAAT CACGCCTTAT TAACAGCACA GGCAATTATT 
AATGATGGGT TGCCCTTATT GGGTTGGGTT GCCAATCGCA TTAATCCTGG CTTGGCCCAT 
TATGCTGAAA CAATCGCAAT GCTACGGGAT CGGTTAGCCG CGCCACAATT AGGGCAACTG 
CCTTATTTGC CGCGACCAGA AGAAAAACCA TTAGCAAAAT ATTTAGATCT TACAGCTATT 
TCAGGATAA
 
Protein sequence
MLTRLFVTGT DTAVGKTVVS RALLQALSQN GRTAVGYKPV ATESKETSEG LRNQDALILQ 
ASSSIELNYQ EVNPYPLQGD VIHACTDTLI NYEKMTEGLQ CLSAKADTVI VEGCGGWKVM 
MNDQRFYSDW VVQEQLPVIL VVGIKLGCIN HALLTAQAII NDGLPLLGWV ANRINPGLAH 
YAETIAMLRD RLAAPQLGQL PYLPRPEEKP LAKYLDLTAI SG