Gene YPK_1976 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYPK_1976 
Symbol 
ID6089380 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pseudotuberculosis YPIII 
KingdomBacteria 
Replicon accessionNC_010465 
Strand
Start bp2196717 
End bp2197466 
Gene Length750 bp 
Protein Length249 aa 
Translation table11 
GC content48% 
IMG OID641597045 
Product3-hydroxy acid dehydrogenase 
Protein accessionYP_001720718 
Protein GI170024213 
COG category[R] General function prediction only 
COG ID[COG4221] Short-chain alcohol dehydrogenase of unknown specificity 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATCATAT TCGTCACTGG TGCGACATCA GGTTTTGGTG AGGCGATTGC CCGTAAATTT 
ATTAGCCACG GTCATCAGGT CATTGCCGCC GGCCGCCGTC AGGAACGTCT GGAAGCGCTA
CAAGCCGAAC TGGGTGCACA ACTGCACATC GTACGTCTGG ACGTGCGTAA TCGCGCAGCT
ATTCAACAAG TTATTGATGA ATTACCTGCT GAGCTGAGGA ATATCGACTT ATTGGTAAAC
AACGCCGGGT TGGCATTGGG ATTAGAGCCA GCACATAAAG CCAACGTTGA TGATTGGGAT
ACAATGATTG ATACCAATAC CAAAGGGTTG GTAAATATGA CTCGAGCCTT ATTACCTGCG
ATGGTTGAAC GTAATGTGGG ACACATTATT AATATTGGCT CTACCGCGGC TAATTGGCCA
TACGCGGGGG GAAATGTGTA CGGCGCGACA AAAGCGTTTG TTAAACAATT TAGTTTGGGT
TTACGTGCCG ACCTACATGG CACTCATATC CGTGTTACCG ATATTGAGCC CGGCCTGGTC
GGCGGTACTG AGTTTTCAGC GGTTCGTTTT AAAGGTGATG GAGAAAAGGT CAATAAAACC
TACGATGGTG CAGATCCCCT GATGCCAGAA GATATCGCTG AAGCTGTTTA TTGGGTTGCA
ACGCTCCCTG CCCGCGTCAA TATTAACTCA TTGGAAATGA TGCCAGTAAG TCAGTCTTTT
GCTGGGCTGA ATATTCATCG CGGTTCCTAA
 
Protein sequence
MIIFVTGATS GFGEAIARKF ISHGHQVIAA GRRQERLEAL QAELGAQLHI VRLDVRNRAA 
IQQVIDELPA ELRNIDLLVN NAGLALGLEP AHKANVDDWD TMIDTNTKGL VNMTRALLPA
MVERNVGHII NIGSTAANWP YAGGNVYGAT KAFVKQFSLG LRADLHGTHI RVTDIEPGLV
GGTEFSAVRF KGDGEKVNKT YDGADPLMPE DIAEAVYWVA TLPARVNINS LEMMPVSQSF
AGLNIHRGS