| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YPK_1975 |
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| Symbol | |
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| ID | 6088682 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Yersinia pseudotuberculosis YPIII |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010465 |
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| Strand | + |
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| Start bp | 2194759 |
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| End bp | 2196603 |
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| Gene Length | 1845 bp |
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| Protein Length | 614 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 641597044 |
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| Product | Fis family GAF modulated sigma54 specific transcriptional regulator |
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| Protein accession | YP_001720717 |
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| Protein GI | 170024212 |
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| COG category | [K] Transcription
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG3284] Transcriptional activator of acetoin/glycerol metabolism |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTGTAGCG AAGGTGTGAA ATTACCAATG CAGGGAAATT TATCAGCCGT CAGCACGCCC
ACTACGGCGT GCAATCAACG ACTCCGTGAC TCTTGGCTGC GTAGCCAACT CTACGGTTTA
GATCGCATGT CCGACGATGT TCCCCGTATT GAGCAGGGAG AACTGGCCGA CTTGCTGGTC
AGTCACGCCG TATTACAGCA ATTTTCTCAG CCAACAGTGA AAGCGCTGGC TGAGAAAATT
GCCGATAAGC AATCGGTAGT GGTCCTCGCC GATGCCAGTG GGTTGGTATT GAATACCTTC
GGCGATATAC AGGCTCTACA AAAAGCACAA CAGTTTGCCC TGACGCCCGG TAATCTATGG
AGTGAATGCA GCCGAGGAAC GAATGCCATT GGTACTGCCC TGGCGATTGA TGATAGCTGC
GAAATCTATG GACATCAGCA TTATCTTATT AACAATCAGG GGCTTTACTG CGCGGCTATG
CCACTGCAAG CGCCTAACGG ACAGATTGCC GGTGTGCTGG ATATATCGGG TCCGGCGTAT
CACTCCCATC CCCACACACT GGCATGGATA AAAAACGCGG CGAAACAAAT TGAGTATTTA
TGGGTGAAAC AGAGCCTGCA TCCAGATCAG TGGCTGATGA GTCTGCATCC ACAAATACAA
GGCATTGATA ATATTGAAGA GCTACTACTG GTGTTCTCTG ATAACACTCT GATGGCAGCT
AACCGTCTGG CGATGCACGA GTTGGCGTTG GGGGCCGACC AGTTTGGTGC CCTAACCTTC
CAGCAACTTT TTCCGCAAAG TAAGCAAGTT GCCAATCAGG TGCCGCACCC TTTAATGGCT
CGCAATCAAC AACGTTATTT CTTTCGCCTA CGGGCGCCAG CACGAAGCCA CTTCCCTGCA
ATAATACACG TTCCCACAAC ACACGTTCCC ACAACATCGG TAACTTCGCC TGACTTATCC
TTCTCACTGC GCGATGACGA TAAGAAAATG GTGCGATTAC TCAATGCTGG CGTCTCGCTT
TGTATAAATG GTGAGACTGG CAGTGGTAAG GAGTATGTTA GCCGGGCTTT ACATCAGCAG
AGCCGGTGGC GGCAAGGTAA GTTTGTTGTT ATCAACTGCG CTGCCATACC AGAGTCTCTG
ATTGAATCAG AACTCTTCGG ATACCAACCG GGTGCATTTA CGGGGGCCAG CAAAAATGGC
TATATTGGCA AAATTCGGGA GGCCGACGGT GGCGTACTGT TTCTGGATGA AATAGGCGAT
ATGCCGTTAT CGCTACAAAC CCGCTTACTC CGAGTATTGC AAGAAAAAGA GGTGACGCCG
CTGGGCTCTA GCCGTAGTTG GCCAGTCAAT TTTGCGGTGG TCTGTGCTAC GCATCGGGAT
CTTCCCCAGT TGGTCGCGGA GGGCGGGTTC CGTGAAGACC TCCTCTACCG ATTGCAAGAG
TTCTCTCTAA CCATTCCGCC ACTGCGTGAA TGGCCCGCGC TGCCCGCCTT TATTTTACAG
CTATGGAGGG CGTTGGGCGG TGAGCAACGG GGCATTCTCT TTACGCCAGC ACTGCTTGAT
ACGCTGGCGA AGCATCCTTG GCCGGGTAAT GTGCGTCAAC TGCAAAGTTT ACTGAAGGTA
TTATTCGCCC TGGCGGATGA CGATGAGGTT CTTGATTGCG AGACACTGCC TGACAACTTC
CGAGGTGAGA ATAGTGAACC GTACCCCGCG CTGCAACAGC ATGACAAGCA GTTTATTGAG
AAAACACTGC AATATTTTAA CGGTAACATC AGTAAAACTG CCAAGGCTTT GGGCATAGCA
CGCAGTACGC TATACCGCCG TGCCGCGCGA GAAAAACGCC AGTAA
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| Protein sequence | MCSEGVKLPM QGNLSAVSTP TTACNQRLRD SWLRSQLYGL DRMSDDVPRI EQGELADLLV
SHAVLQQFSQ PTVKALAEKI ADKQSVVVLA DASGLVLNTF GDIQALQKAQ QFALTPGNLW
SECSRGTNAI GTALAIDDSC EIYGHQHYLI NNQGLYCAAM PLQAPNGQIA GVLDISGPAY
HSHPHTLAWI KNAAKQIEYL WVKQSLHPDQ WLMSLHPQIQ GIDNIEELLL VFSDNTLMAA
NRLAMHELAL GADQFGALTF QQLFPQSKQV ANQVPHPLMA RNQQRYFFRL RAPARSHFPA
IIHVPTTHVP TTSVTSPDLS FSLRDDDKKM VRLLNAGVSL CINGETGSGK EYVSRALHQQ
SRWRQGKFVV INCAAIPESL IESELFGYQP GAFTGASKNG YIGKIREADG GVLFLDEIGD
MPLSLQTRLL RVLQEKEVTP LGSSRSWPVN FAVVCATHRD LPQLVAEGGF REDLLYRLQE
FSLTIPPLRE WPALPAFILQ LWRALGGEQR GILFTPALLD TLAKHPWPGN VRQLQSLLKV
LFALADDDEV LDCETLPDNF RGENSEPYPA LQQHDKQFIE KTLQYFNGNI SKTAKALGIA
RSTLYRRAAR EKRQ
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