Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YPK_1947 |
Symbol | |
ID | 6087505 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pseudotuberculosis YPIII |
Kingdom | Bacteria |
Replicon accession | NC_010465 |
Strand | + |
Start bp | 2161677 |
End bp | 2164010 |
Gene Length | 2334 bp |
Protein Length | 777 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 641597016 |
Product | hypothetical protein |
Protein accession | YP_001720689 |
Protein GI | 170024184 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.231119 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACAGATA TCCCAAGAGA AGCATGGGTT GCACTGAGTT TTGCTATTTT ATGCCTGTTT TTTGTTTGGA AAAATATCCG TTGGGCTAAG ATTGGTTCTG GACCGTCCAT CAATTCAGAC GTACCGAAAG CCTCAGCGAT ACCCGATCTG GGCGGTTATC AGCTAGACTC TCTGGCCCTT CATCCTGAAC TCGTCATTGA TGATGAGCTT ACCGATCACC TTGATCAATC TGCTAGTGCT AAACCCTCTT CTGGTGATAA ACCCTCTGCG AGTACTAAAC AGTCAGAAAT TTCAAGAGGC TCTCTGGCCC GTGCGTCCTG GCTTCGCCCC GGCGAATTAG CCGTGGTTGC CGGGATAACC TTAGCCGATG GCATGATCTA CATTGGTAAT AAACATAAGA GCAATCGCAC CGGAGCAGAG CCGGCCTTTA TCAATCCATC AATGCAGGTC GCCGAAGAAG AGGTAGACAT TTCATTGGCG CTGATCGATA ACGCCCCCGA TTACTCGACA TGTTCCCCGG AGGCGAGAAA AGCGTATTTG CAATGGTTAT CGGAAGGTCG TAAATCTCCA ATTGCTCATA TTAGTTATGT TTTCTTATTT TTTTATGGAT TAGAGCACCG CGTACTGATT GATGCGAGTA TTGATCCAAT CGCAAAACGA GAGCTGCCCA TTATTGAGGC GGAAATTAAC CGATTGCTGA ATATTTATGG AAAAAATAAC ACTTTTAATC ATTATGCTCA GAATTTATTA GTTTATATCG CCAGAGTCGA TATAGAGGAG ACGCTCTATT TATTGCCACC GCCATTAAGC CGAAATGCCT CAACCGAACT GCCACTTGCT TTGTTGGTTG GCTTAGGGCA ATTGGCTGTG GACCAACGGC CATTACCTGC AGAGTGGGCC TGTGCGTGGG GGGTTGCGGA TCCAGCCATT AACCAAAACA GATCCTTGAT GCATTGTCCT GATGCCTTCT CCCAACTTTT CCAACAGCGC TATCGGGATA AATACGGCGA TGGCTTTATC TTGCCCGTCA ATAAAACCAA ACTACATATT TTCTACCGTC CTGCTTCCGC AGGGTTAATG GGGCAAGAGT TCATCCAGCA GATGGGTGAG TTACCCAACG TGGCAGTATG TAAAGCCAAT AGAGATAAGC TGCGGTCATT AATTGAAGCA TGTCAGAACG ATCTCGAGGC TTATAACCGC TTTGTGAGTT TGAATCCTAA GAAAAAAGCA GCATTAGAAG GGCTGTTACT TCTCCCGATG CCGTTGTGGC CAGAGGCATT AAACGCTGAG CTGGAAAGTA TTAAAAGCCG AGTGGGCTAT GGCTTACTGT TGATAACATT GGATGAACTT TTTGCCCAAC TCAGCCATGC CTGCGCATCA AACCCACTAG AACGTTTATC CCGCAATGTG GTCATTGCGC TGACTCAGGC GTTGGCATCC TTGCAGGTTG GTATAGAGCC TGATGTTCGG GCAGATAATC GTACACCAAC CTTGCAAGAT ACAGTTGCTC TGTTTCCTAT TGAGTCCGCG ACGGCGGAGT CGACAACCTT TGCCGTCTAC CGTATCACGA TGTTAGCCGT CGAGTTGGCT TGTGCCGCAG TGATGGTTGA TGGCCGAGTT GGGGAACCCG AATCGATGAT TTTGACGCGG CATATTGATG CCTGGAGCTA CCTTAGCCCT GGTCAACGTA TGCGTCTGAA AGCCTATCTT CAACCGGGGG TCAGGAAGAA TAATACGTTG TTGGCCTTGA AAAATAACCT TGAGCCGCTA TCGCTTGAAC ATCGCCGTGC TATTGCCCGT TTCCTGGCAC ACCTGATTCA GGTCGAAGGG ACCATTACCC CACAAGATGT GAAATTTCTT GAGCGGGTAT ATAAGCGTTT TGCCCTAGAC AGCAAACTGG TTTATACCGA TCTTGATAGC TGTGCGACCC CGATGACATT AAGTTTGCCG CCACCAGGTT CGGTAGCACT AAATAGTGTT GATCGCATTA CGCTACTGAA AAATGAAAGT CAGGAATTGG TGGCGCTGTT GGAGAATTTA TTTCTAACCA AAGTGGTGGC GACAGAGGAT AAAGAAGAGA TTGATCCACA ATCAATGGCG GCAATAATGG CTGATATGCA GGAAGGAACC GTGACGCTCC TACGATTACT GATTTCACGC AATGCATGGG AGCGTGATAA ATTAACCGAT ATCGCGCTGG ACATGGAAAT CAGACTGGAC GATATACTGA TTGAGATTAA TCGCAAGATA TTGGCTGTTT TTGACGTACC GCTGATTACT GGCGATGCGG TTATTTCAAT TAATCGTGAT GTCTCGGCTG CATTATTGGC CTGA
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Protein sequence | MTDIPREAWV ALSFAILCLF FVWKNIRWAK IGSGPSINSD VPKASAIPDL GGYQLDSLAL HPELVIDDEL TDHLDQSASA KPSSGDKPSA STKQSEISRG SLARASWLRP GELAVVAGIT LADGMIYIGN KHKSNRTGAE PAFINPSMQV AEEEVDISLA LIDNAPDYST CSPEARKAYL QWLSEGRKSP IAHISYVFLF FYGLEHRVLI DASIDPIAKR ELPIIEAEIN RLLNIYGKNN TFNHYAQNLL VYIARVDIEE TLYLLPPPLS RNASTELPLA LLVGLGQLAV DQRPLPAEWA CAWGVADPAI NQNRSLMHCP DAFSQLFQQR YRDKYGDGFI LPVNKTKLHI FYRPASAGLM GQEFIQQMGE LPNVAVCKAN RDKLRSLIEA CQNDLEAYNR FVSLNPKKKA ALEGLLLLPM PLWPEALNAE LESIKSRVGY GLLLITLDEL FAQLSHACAS NPLERLSRNV VIALTQALAS LQVGIEPDVR ADNRTPTLQD TVALFPIESA TAESTTFAVY RITMLAVELA CAAVMVDGRV GEPESMILTR HIDAWSYLSP GQRMRLKAYL QPGVRKNNTL LALKNNLEPL SLEHRRAIAR FLAHLIQVEG TITPQDVKFL ERVYKRFALD SKLVYTDLDS CATPMTLSLP PPGSVALNSV DRITLLKNES QELVALLENL FLTKVVATED KEEIDPQSMA AIMADMQEGT VTLLRLLISR NAWERDKLTD IALDMEIRLD DILIEINRKI LAVFDVPLIT GDAVISINRD VSAALLA
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