Gene YPK_1936 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYPK_1936 
Symbol 
ID6087443 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pseudotuberculosis YPIII 
KingdomBacteria 
Replicon accessionNC_010465 
Strand
Start bp2147915 
End bp2149219 
Gene Length1305 bp 
Protein Length434 aa 
Translation table11 
GC content47% 
IMG OID641597005 
Productsensor protein RstB 
Protein accessionYP_001720678 
Protein GI170024173 
COG category[T] Signal transduction mechanisms 
COG ID[COG0642] Signal transduction histidine kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGAAAGC TATTTATTCA GTTTTTTTTG TTGTTATTTG TTTGCTTCAT GGTGATGGCG 
ATGCTGGTTG GCCTGGTTTA TAAGGTCACC GCTGAGCGCG CGGGTCGTCA GTCTTTAGAT
GACCTGATGA AAAGTTCACT ATCACTGATG CGCAGCGAAT TGCGGGAGAT CCCGCTAAAA
GACTGGAATA AAACCATCGC AACATTAGAT TTAAATCTTT CTTTTCAACT TCATATCGAA
CCATTAGATA AACGTGATCT TGGCGCACAA TTGAACAAAC GGCTACGTGC GGGTGAAATT
ATTGCATTGG ATGATGAATA TACCTTCCTG CAACGTATCC CTCGTAGCCA CTATGTTCTG
GCGGTTGGCC CGGTCCCTTA TCTATTTTAT TTACACCAGA TGAGGCTGCT CGATTTAGCA
TTATTAATCT TGATTGGCCT GTCGTTAGCT CTTCCGGTAT TTCTCTGGAT GAGACCGCAC
TGGAAAGATC TTCTCAAATT AGAAAATGCC GCTCAGAGAC TGGGCTCAGG CCACCTTGAC
GAACGGACTC ATTTCGACCC CACTTCCAGT CTAAGCCGTT TAGGCGTGGC TTTTAACCAA
ATGGCTGACA ACATCAACAC CCTGATTGTT AGCAAAAAAT TACTGATTGA TGGTATAGCA
CACGAACTAC GGACACCATT GGTACGCTTA CGTTATCGAT TAGCGATGAG TGATAACCTG
ACCGAAAGCG AACAGCAGGC GTTACATCAT GATATCGGTC AATTGGAAGC ACTTATTGAT
GAACTACTGA CCTATGCACG TTTGGATCGC CCACAAGTTT CCCTCAATCT GGAACCTATC
GACCTACCGG CCTGGCTAAC AACCAAAATC ATGGATATCC GCTCGATTCA TCAAGAGCGT
GAGATCGAAC TTGATATTCC CCACCGTGGT GATTTTGGTG CCGTTGACCT GCGTCTGATG
GAGCGAGTGC TGGATAACCT GGTCAATAAT GCCCTACGCT ATTCACATCA ACGGCTGCGC
ATAGGGTTAT GGTTCGATGG CGATAACGCC TGCCTACAGG TTGAAGATGA CGGCCCCGGT
ATCCCGCCAG AAGAACGGAC ACGAATTTTT GAACCCTTTG TTCGTTTAGA CCCCAGCCGT
GATCGCGCCA CTGGTGGCTG TGGATTGGGG CTGGCCATTG TCCATTCGAT TGCACTGGCC
TATCAAGGCA GTATCTCTGT CAATACCAGT CCATTAGGTG GGGCCAGTTT CCGCTTTAGT
TGGCCGATAA AAACACATTT GCCTCTATCC GCTGATCAGA ATTAA
 
Protein sequence
MRKLFIQFFL LLFVCFMVMA MLVGLVYKVT AERAGRQSLD DLMKSSLSLM RSELREIPLK 
DWNKTIATLD LNLSFQLHIE PLDKRDLGAQ LNKRLRAGEI IALDDEYTFL QRIPRSHYVL
AVGPVPYLFY LHQMRLLDLA LLILIGLSLA LPVFLWMRPH WKDLLKLENA AQRLGSGHLD
ERTHFDPTSS LSRLGVAFNQ MADNINTLIV SKKLLIDGIA HELRTPLVRL RYRLAMSDNL
TESEQQALHH DIGQLEALID ELLTYARLDR PQVSLNLEPI DLPAWLTTKI MDIRSIHQER
EIELDIPHRG DFGAVDLRLM ERVLDNLVNN ALRYSHQRLR IGLWFDGDNA CLQVEDDGPG
IPPEERTRIF EPFVRLDPSR DRATGGCGLG LAIVHSIALA YQGSISVNTS PLGGASFRFS
WPIKTHLPLS ADQN