Gene YPK_1916 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYPK_1916 
Symbol 
ID6088975 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pseudotuberculosis YPIII 
KingdomBacteria 
Replicon accessionNC_010465 
Strand
Start bp2124197 
End bp2124520 
Gene Length324 bp 
Protein Length107 aa 
Translation table11 
GC content48% 
IMG OID641596987 
Productputative lipoprotein 
Protein accessionYP_001720660 
Protein GI170024155 
COG category[R] General function prediction only 
COG ID[COG3042] Putative hemolysin 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGAATAT TTCAGGGAGT AGTGTGCGGT ATGGCGCTAT TTTTAGCCGC ATGTAGCAGC 
AATGATTCAA ATATCAATAC GTTAAATAAT AGCAAGACCT ACGAACCCGA GCAGCAGGCT
ACCAACGCTA TCGCTTATCG CAATGTGAAT ATGTCAAATG ACGTCAATAT GTCCAATTCG
GCGGCAGCTA ATTGTGCTAA TGCGGGGGGA ATATTGGCTA ACACGAGGCA ACTTCATGGC
GGTAGCGTAG GCATGTGCCA GTTACCGGAT GGCAAACGTT GTGACGAGGA AGCGTTGTTG
CGCGGTGCAT GCCCGGTGCG TTAA
 
Protein sequence
MRIFQGVVCG MALFLAACSS NDSNINTLNN SKTYEPEQQA TNAIAYRNVN MSNDVNMSNS 
AAANCANAGG ILANTRQLHG GSVGMCQLPD GKRCDEEALL RGACPVR