Gene YPK_1901 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYPK_1901 
Symbol 
ID6088161 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pseudotuberculosis YPIII 
KingdomBacteria 
Replicon accessionNC_010465 
Strand- 
Start bp2106592 
End bp2107038 
Gene Length447 bp 
Protein Length148 aa 
Translation table11 
GC content51% 
IMG OID641596972 
Producthypothetical protein 
Protein accessionYP_001720645 
Protein GI170024140 
COG category[S] Function unknown 
COG ID[COG5642] Uncharacterized conserved protein 
TIGRFAM ID[TIGR02293] putative toxin-antitoxin system antitoxin component, TIGR02293 family 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.451689 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGAGCGT ACCGCCCAAA CCCCGCGACT AAAATGGGAA CGCTTTGGCG TGAAATTGGC 
TTACCCGCCA GCCGCGGCAC GATATTGGTC GATAGTATCA AAATGGGGTT TTCTGTTGAT 
GTTATCGACA GCATTCATTT ATGGGCATCC ATGCCTAAAG CTGAAATATT ACGTGCTACC 
GGTATCCCCA GCCGTAGCCT GACTCGCCGC CGCACACATG ATGGCCGTTT TACGCCTGAA 
GAAAGCGAGA GAATCGCACG TTTTGTCCGC GTAATGGATG CCGCTGTCGA TTTGTTCGGC 
GGCGATAAAG GTAAAGCCAT TACCTGGATG TCCACGCCCA TCAAAGGATT GGGGTACCGC 
AGCCCAGATT CCTTACTGGA AACCGAAACT GGCGCACTGG AAGTGTGTGA TTTGATTGGT 
CGTTTGGAAC ACGGCGTCTT TACTTAA
 
Protein sequence
MRAYRPNPAT KMGTLWREIG LPASRGTILV DSIKMGFSVD VIDSIHLWAS MPKAEILRAT 
GIPSRSLTRR RTHDGRFTPE ESERIARFVR VMDAAVDLFG GDKGKAITWM STPIKGLGYR 
SPDSLLETET GALEVCDLIG RLEHGVFT