Gene YPK_1900 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYPK_1900 
Symbol 
ID6088626 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pseudotuberculosis YPIII 
KingdomBacteria 
Replicon accessionNC_010465 
Strand
Start bp2106072 
End bp2106530 
Gene Length459 bp 
Protein Length152 aa 
Translation table11 
GC content49% 
IMG OID641596971 
ProductRES domain-containing protein 
Protein accessionYP_001720644 
Protein GI170024139 
COG category[S] Function unknown 
COG ID[COG5654] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.548164 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACGCTAT ACCGCATTGT TATGCGCCGC TATCTTGCAT CGGCATGGAC TGGTTACGGC 
GCTGAAATCT ATGGTGGTCG TTGGAATCAT AAAGGCCATG CTGCCATCTA TTTAGCCAGC
AGTATTTCAT TGGCTATGCT CGAAACACTG GCTCATATTC AGGACAGTTC AACACTCAGC
GAATTTGAAT TATTCCAAAT TGAAATCAGT GACAGCAGTA TTATGTTGCT ACAGCCGCAG
GACTGGCCCA CGGATTGGCG TAGCGATCCG GCACCGGTGG CAACGATGGA TGTCGGCACC
GAGTGGCTGG AATCAGAATC CTCGCTAGGC TTACTGGTCC CGTCCACGTT GGTGCCGTCA
GAAAACAACC TACTGGTCAA TCCTCATCAC AAAGATTTTC CAGCGTGTTT GGCCAGCGTC
AAACCGCTCT CTTTTGTCTT TGATCCACGG TTAAAATAG
 
Protein sequence
MTLYRIVMRR YLASAWTGYG AEIYGGRWNH KGHAAIYLAS SISLAMLETL AHIQDSSTLS 
EFELFQIEIS DSSIMLLQPQ DWPTDWRSDP APVATMDVGT EWLESESSLG LLVPSTLVPS
ENNLLVNPHH KDFPACLASV KPLSFVFDPR LK