Gene YPK_1898 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYPK_1898 
Symbol 
ID6089076 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pseudotuberculosis YPIII 
KingdomBacteria 
Replicon accessionNC_010465 
Strand
Start bp2103607 
End bp2105004 
Gene Length1398 bp 
Protein Length465 aa 
Translation table11 
GC content50% 
IMG OID641596969 
Productprotein of unknown function DUF463 YcjX family protein 
Protein accessionYP_001720642 
Protein GI170024137 
COG category[R] General function prediction only 
COG ID[COG3106] Predicted ATPase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.275408 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAACGAC TGCAAAATGA GCTTACATCA TTGGTTAACC GCGGGATGGA TCGCCATTTG 
CGTTTAGCGG TAACCGGCCT GAGCCGCAGT GGAAAAACCG CCTTTATCAC TTCTTTAGTG
AATCAATTAC TGCATGTCCA CAGTGGTGCG CGTCTGCCGC TGTTTTCTGC GGTGCGTGAC
GAAAGGCTAC TGGGTGTTAA GCGGGTTCCA CAGCGTGATC TGGGTATTCA ACGTTTTACG
TATGATGAAG GCTTGGCTTC TTTGTATGGT ACGCCACCAA ATTGGCCAAC GCCGACCCGT
GGCGTCAGCG AAATCCGTCT GGCGTTACGT TTTCGCTCCA GTGATTCGCT GTTGCGCCAT
TTTAAAGAGA CATCAACGCT GTATCTGGAG ATTGTTGATT ATCCCGGGGA GTGGTTACTG
GATTTACCCA TGTTGGAGCA GGACTATTTG AGTTGGTCCC GCCAGATGGA AGGGTTGTTG
CAAGGGGATC GCGCTGAGTG GGCCAAGCCT TGGCTAGCGC TATGCCAGCA ATGTGATCCA
TTAGCTCCGG CCAATGAAAA CCAACTGGCT GCTATCGCGC AGGCGTATAC CGATTATCTT
GTCCGCTGTA AAAATGAAGG CCTGCATTTT ATTCAACCGG GGCGTTTTGT GCTGCCTGGC
GATATGGCAG GTGCCCCCGC ATTACAGTTC TTCCCTTGGC TGGATGTCAA TGGCATTGGG
GAGTCGCGTT TGGCTCAGGC CGATAAACAC TCAAATCTGG GCATGTTGCG CACCCGTTTT
AACTATTACT GTAATACGAT CGTTAAAGGC TTTTATAAAG AGCATTTTGT TCGTTTTGAT
CGGCAAATCG TACTGGTAGA TTGCCTCCAG CCACTTAATA GTGGGCCTCA GGCGTTTAAC
GATATGCGTT TGGCGTTGAC ACAATTAATG CAGAGTTTCC ATTATGGGAA ACGCACGTTA
TTTCGCCGTT TATTCTCTCC ATGTATTGAT AAGTTGATGT TTGCGGCAAC CAAAGCAGAC
CATGTGACTG CTGACCAGCA TGCTAATTTG GTCTCATTAT TACAACAACT GGTGCAGGAA
GCTTGGCAGA ATGCGGCTTT TGAAGGGATC AGCATGGATT GTGTCGGGTT GGCCTCGGTA
CAGGCCACCG AAAGTGGCAT GGTTGATCAC CAAGGGCAAA AAATACCGGC ACTGCGCGGC
CATCGCTTAG AAGATGGTGC CCCATTAACG GTGTTCCCCG GTGATGTTCC GGCCCGTTTA
CCTGGCCCTG CATTCTGGCA ACAGCAAGGT TTCCATTTTG ACCAGTTCCG TCCGCAAGCG
GTTCATATTG ACAGCCCATT ACCTCATATC CGGTTAGATG CGGTGATGGA GTTTTTATTG
GGAGATAAAT TGCGATGA
 
Protein sequence
MKRLQNELTS LVNRGMDRHL RLAVTGLSRS GKTAFITSLV NQLLHVHSGA RLPLFSAVRD 
ERLLGVKRVP QRDLGIQRFT YDEGLASLYG TPPNWPTPTR GVSEIRLALR FRSSDSLLRH
FKETSTLYLE IVDYPGEWLL DLPMLEQDYL SWSRQMEGLL QGDRAEWAKP WLALCQQCDP
LAPANENQLA AIAQAYTDYL VRCKNEGLHF IQPGRFVLPG DMAGAPALQF FPWLDVNGIG
ESRLAQADKH SNLGMLRTRF NYYCNTIVKG FYKEHFVRFD RQIVLVDCLQ PLNSGPQAFN
DMRLALTQLM QSFHYGKRTL FRRLFSPCID KLMFAATKAD HVTADQHANL VSLLQQLVQE
AWQNAAFEGI SMDCVGLASV QATESGMVDH QGQKIPALRG HRLEDGAPLT VFPGDVPARL
PGPAFWQQQG FHFDQFRPQA VHIDSPLPHI RLDAVMEFLL GDKLR