| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YPK_1890 |
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| Symbol | |
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| ID | 6088302 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Yersinia pseudotuberculosis YPIII |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010465 |
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| Strand | - |
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| Start bp | 2096573 |
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| End bp | 2097463 |
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| Gene Length | 891 bp |
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| Protein Length | 296 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 641596961 |
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| Product | binding-protein-dependent transport systems inner membrane component |
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| Protein accession | YP_001720634 |
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| Protein GI | 170024129 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG4171] ABC-type antimicrobial peptide transport system, permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.121363 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCCTTCG ATAATGTCTA CCGCGAAAAG AAAATGCCCA GCCCATTGCT GTATACCTGG
CGTCTTTTCT CTTCTGATGG CCTGGCGATG GTGGGTTTCT ACGGCGTCTT GGGTTTATTA
TTGCTGTGTC TGTTGGGGAG CACGCTTGCG CCTTATACTC TCGATCAACA GTTTTTAGGC
TATCAGCTAT TGCCACCTTC TTGGTCACGT TATGGCAATG TTTCCTTCTT CCTAGGGACC
GATGACCTCG GTCGTGATGT ATTGAGCCGC TTACTGACAG GTACCGCGTC TACTTATGGT
TCAGCGCTCC TGGTCACCGT AGCTGCGGCG TTGTGTGCCA TTGTTCTCGG TGTATTTGCC
GGTATCACCC GTGGTTTGCG GTCCGCGATC CTTAATCATG TGCTGGATAC ACTGCTCTCA
ATACCTTCAC TGCTGTTAGC CATCATCGTG GTCGCCTTTG TCGGGCCAAG TTTGGAACAT
GCGATGTTTG CCGTTTGGCT GGCGCTGTTA CCACGAATGG TGCGAACCAT TTATAGCGCA
GTGCATGATG AGCTTGATAA AGAATATGTG ATTGCAGCCC GTCTGGACGG CGCATCAACA
CCGCACATTC TGGCCTATGC CATCTTGCCG AATATCGCCT CAGTCCTGGT CACTGAGTTT
ACCCGAGCGT TATCAATGGC GATCCTGGAT ATTGCCGCAT TAGGTTTCCT TGACCTCGGC
GCACAATTAC CCTCTCCCGA ATGGGGAGCA ATGCTCGGTG ATTCGCTGGA TTTGGTTTAT
GTCGCACCAT GGACCGTGAT GCTGCCAGGC GGCGCAATTT TGGTTAGTGT ACTGTTGGTT
AATCTGCTGG GTGATGGTAT GCGCCGTGCC ATTAATGCGG GGGTGGAATA A
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| Protein sequence | MPFDNVYREK KMPSPLLYTW RLFSSDGLAM VGFYGVLGLL LLCLLGSTLA PYTLDQQFLG
YQLLPPSWSR YGNVSFFLGT DDLGRDVLSR LLTGTASTYG SALLVTVAAA LCAIVLGVFA
GITRGLRSAI LNHVLDTLLS IPSLLLAIIV VAFVGPSLEH AMFAVWLALL PRMVRTIYSA
VHDELDKEYV IAARLDGAST PHILAYAILP NIASVLVTEF TRALSMAILD IAALGFLDLG
AQLPSPEWGA MLGDSLDLVY VAPWTVMLPG GAILVSVLLV NLLGDGMRRA INAGVE
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