Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YPK_1888 |
Symbol | |
ID | 6088845 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pseudotuberculosis YPIII |
Kingdom | Bacteria |
Replicon accession | NC_010465 |
Strand | - |
Start bp | 2094766 |
End bp | 2095581 |
Gene Length | 816 bp |
Protein Length | 271 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 641596959 |
Product | ABC transporter related |
Protein accession | YP_001720632 |
Protein GI | 170024127 |
COG category | [V] Defense mechanisms |
COG ID | [COG4167] ABC-type antimicrobial peptide transport system, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.26331 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCCGAGA CGTTGCTCGA AGTCCGTAAT CTGAGCAAAA CTTTCCGCTA TCGTACCGGG CTGTTTCGCC GTCAACATGT TGAGGCGGTA AAATCGGTGA GTTTTACCTT ACGCGAAGGC CAAACACTGG CGGTGATTGG TGAAAATGGT TCGGGCAAAT CCACGTTGGC AAAAATGTTG TCGGGCATGA TTGAGCCCAC CGCGGGTGAA TTACTGATTG ATGATCATCA TCTCGCTTAT GGTGACTATG CTTACCGTAG CCAACGTATT CGTATGATTT TTCAAGACCC AAGCACCTCA CTGAATCCTC GCCAGCGCAT TGGCCAGTTG CTGGATGCCC CACTGAAACT GAATACAGAA CTCGATGCTC CGGCACGTGA ACAGCGGATC TACCAAACAC TGCGTCAGGT AGGGTTATTA CCCGATCACG CTAATTACTA TCCCCACATG TTAGCATCCG GCCAAAAACA GCGGGTGGCA CTGGCACGGG CTCTGATTCT GCAACCCAAA GTGATTATCG CGGATGAAGC ATTGGCCGCA TTAGATATGT CCATGCGCTC ACAAATTATT AATCTAATGC TGGAGTTGCA GGAAAAACAC GGCATATCCT ACATTTATGT GACTCAACAC TTGGGGATGA TGAAACACAT CAGCGACCAG GTAATTGTGA TGCATGAAGG CGAAGTTGTA GAGCGTGGGA GTACGGCGGA AGTCTTGGCA GCCCCGCTGC ACGACCTGAC TAAGCGTTTG ATCTCCAGCC ATTTTGGTGA AGCATTGACT GCGGATGCCT GGCGTCGAGA TACCAGCAAT TTTTAG
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Protein sequence | MAETLLEVRN LSKTFRYRTG LFRRQHVEAV KSVSFTLREG QTLAVIGENG SGKSTLAKML SGMIEPTAGE LLIDDHHLAY GDYAYRSQRI RMIFQDPSTS LNPRQRIGQL LDAPLKLNTE LDAPAREQRI YQTLRQVGLL PDHANYYPHM LASGQKQRVA LARALILQPK VIIADEALAA LDMSMRSQII NLMLELQEKH GISYIYVTQH LGMMKHISDQ VIVMHEGEVV ERGSTAEVLA APLHDLTKRL ISSHFGEALT ADAWRRDTSN F
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