Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YPK_1880 |
Symbol | |
ID | 6087676 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pseudotuberculosis YPIII |
Kingdom | Bacteria |
Replicon accession | NC_010465 |
Strand | + |
Start bp | 2085488 |
End bp | 2086210 |
Gene Length | 723 bp |
Protein Length | 240 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 641596951 |
Product | pyridoxamine 5'-phosphate oxidase |
Protein accession | YP_001720624 |
Protein GI | 170024119 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0259] Pyridoxamine-phosphate oxidase |
TIGRFAM ID | [TIGR00558] pyridoxamine-phosphate oxidase |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 0.863598 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATTGTGA TTCTGTGGCG GCGAGGGCAG AATGATAACC ACAGCTTTCC TGCGCGTTAC AGAGTTTATA TGACTGAGAA TAATGAGTTT GATGTTGCAG ACTTGCGTCG TGAGTATATT CGGGGTGGTC TGCGCCGCAG TGATTTAACT GAAAACCCTT TAGAATTATT CGAGCGCTGG TTAAAACAGG CATGTGAAGC TCGCTTGCCC GATCCGACCG CAATGTGTGT GGCTACCGTT GATATCAATG GTCAGCCCTA CCAGCGTATC GTGCTCTTGA AACATTATGA TGATCAGGGC TTAGTGTTTT ACACTAATTT AGGTAGCCGC AAAGCACAAC AATTGGCTGA GAACCCGCAT ATCAGCCTAT TGTTTCCCTG GCATATGCTG GATCGGCAAG TGATTTTCCT CGGCAAGGCG GAGCGCCTCT CCACATTGGA AGTCCTGAAG TATTTCCATT CCCGTCCGAA AGACAGTCAA ATTGGTGCTT GGGTTTCCCA GCAATCCTCA CGTATTTCTG CTCGTGGTGT CCTGGAAAGC AAATTTCTTG AGCTGAAACA AAAATTCCAG CAGGGTGACG TACCGCTGCC CAGTTTTTGG GGCGGGTTTC GCGTCAAATT CGATTCCGTT GAGTTTTGGC AGGGGGGGGA ACATCGCCTT CATGACCGTT TTATCTATCA ACGGGAAGCC GACGCGTGGA AAATTGACCG TTTAGCCCCT TAG
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Protein sequence | MIVILWRRGQ NDNHSFPARY RVYMTENNEF DVADLRREYI RGGLRRSDLT ENPLELFERW LKQACEARLP DPTAMCVATV DINGQPYQRI VLLKHYDDQG LVFYTNLGSR KAQQLAENPH ISLLFPWHML DRQVIFLGKA ERLSTLEVLK YFHSRPKDSQ IGAWVSQQSS RISARGVLES KFLELKQKFQ QGDVPLPSFW GGFRVKFDSV EFWQGGEHRL HDRFIYQREA DAWKIDRLAP
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