Gene YPK_1879 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYPK_1879 
Symbol 
ID6089075 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pseudotuberculosis YPIII 
KingdomBacteria 
Replicon accessionNC_010465 
Strand
Start bp2085152 
End bp2085466 
Gene Length315 bp 
Protein Length104 aa 
Translation table11 
GC content43% 
IMG OID641596950 
Producthypothetical protein 
Protein accessionYP_001720623 
Protein GI170024118 
COG category[R] General function prediction only 
COG ID[COG3895] Predicted periplasmic protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.116549 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAATATC TATTTGCAGC AACAGTACCG TTGCTGTTGG CAGGGTGCAG TTTGCTTCAA 
TCGATGAATG GCACGTCGGT GAATGAAACG CTACATTATC AGTGTGGTAC CACAAAACTG
ACGGTGACTC AGAACAATAA GCAGGATAAC GTTAGTTTCA TCATGGATGG CAAACAATTA
ACGCTACCAC AAGTCCGTGC TGCATCAGGG GCCAAATACA GTGATGGTCA TTATACTTTC
TGGTCGAAGG GTGATAGCGC ATTTATTGAG CGCGAGGAGA AAGTCATCAT TAATGATTGT
GTTTTGATCA AGTAA
 
Protein sequence
MKYLFAATVP LLLAGCSLLQ SMNGTSVNET LHYQCGTTKL TVTQNNKQDN VSFIMDGKQL 
TLPQVRAASG AKYSDGHYTF WSKGDSAFIE REEKVIINDC VLIK