Gene YPK_1878 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYPK_1878 
SymbolanmK 
ID6087917 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pseudotuberculosis YPIII 
KingdomBacteria 
Replicon accessionNC_010465 
Strand
Start bp2083982 
End bp2085094 
Gene Length1113 bp 
Protein Length370 aa 
Translation table11 
GC content52% 
IMG OID641596949 
Productanhydro-N-acetylmuramic acid kinase 
Protein accessionYP_001720622 
Protein GI170024117 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG2377] Predicted molecular chaperone distantly related to HSP70-fold metalloproteases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.0247592 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAATCAG GCCGTTTTAT TGGAGTGATG TCAGGAACCA GCCTGGACGG TGTGGATGTT 
GTTCTGGCAG CTATTGATGA GCGTATGGTG GCGCAGCAAG CCTCATATAC CCATCCAATT
CCACTACAAC TGAAAAAAGA CATCCTTGGT ATGTGTCAGG GGCAGTCCAC GACCTTGTCA
GCAGTGGGAA AACTTGATGC CCAACTGGGT ATTCTGTTTG CAGAAGCGGT GTTGGCTTTA
CTCGCCAAAG AAGGGTTGTC TGCGCAGGAT ATTACCGCCA TTGGTTGCCA TGGGCAGACT
GTCTGGCATG AACCATTAGG TGAACCCGCC TTTACTATGC AACTCGGCGA CAATAATCGT
ATTGCCGCGA TGACCCAAAT TGCCACTGTG GGGGATTTCC GCCGTCGTGA TATGGCCTAT
GGCGGGCAGG GGGCCCCCTT GGTGCCCGCT TTCCATCATG CGTTATTAGC GCATGCGACG
GAAAAACGTA TGGTCTTGAA TATTGGTGGG ATTGCTAATT TATCCGTCCT ACTACCTGAT
TCGCCTATTC GGGGTTTTGA TACTGGCCCC GGTAATATGT TGATGGATGC ATGGATCTGG
CGCAATTGCT CATTACCTTA TGATAAAGAT GCCTGCTGGG CGTTATCAGG GCATGTTAAT
CAGCCGTTGC TTGAGCAAAT GTTCAACGAT CCTTACTTTC GGTTACCTGC GCCGAAAAGT
ACCGGTCGTG AATACTTCAA TGCCGCGTGG CTGGATAAGC AACTGGCCAG AATCCCAGGG
GTAACCGCTG AAGATATACA GGCAACATTG GCTGAGTTAA CGGCGGTATC GATCACGGAA
CAGGTTCGGT TAGCGGGAGG ATGTGATCGC TTGCTGGTGT GTGGCGGGGG GGCTCGTAAC
CCATTAGTCA TGGCGCGCAT CTCAGCGTTA CTGTCGGGAA CGGAAGTGTG TACTACCGAT
GACGCGGGTA TCCGTGGTGA CGATATGGAA GCACTGGCGT TTGCCTGGCT GGCGTTTCGC
ACGTTGTCTG GTAAACCGGG TAATTTGCCT TCTGTCACGG GGGCCAGCCG CGAGACCATT
TTAGGAGCAG TCCATCCTGT ATCATCATGG TGA
 
Protein sequence
MKSGRFIGVM SGTSLDGVDV VLAAIDERMV AQQASYTHPI PLQLKKDILG MCQGQSTTLS 
AVGKLDAQLG ILFAEAVLAL LAKEGLSAQD ITAIGCHGQT VWHEPLGEPA FTMQLGDNNR
IAAMTQIATV GDFRRRDMAY GGQGAPLVPA FHHALLAHAT EKRMVLNIGG IANLSVLLPD
SPIRGFDTGP GNMLMDAWIW RNCSLPYDKD ACWALSGHVN QPLLEQMFND PYFRLPAPKS
TGREYFNAAW LDKQLARIPG VTAEDIQATL AELTAVSITE QVRLAGGCDR LLVCGGGARN
PLVMARISAL LSGTEVCTTD DAGIRGDDME ALAFAWLAFR TLSGKPGNLP SVTGASRETI
LGAVHPVSSW